Gene Gbem_4051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_4051 
Symbol 
ID6780914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4602548 
End bp4603057 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content61% 
IMG OID642770044 
Productintracellular protease, PfpI family 
Protein accessionYP_002140837 
Protein GI197120410 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCC TGATTTTAAG TGCGGATAAT TTCGAAGATA CCGAATTGCT GGTTCCTCTT 
TACAGACTGC GCGAGGCCGG GTATGCGGTC GACGTGGCAT CGGAAAAGGC GGGTTCCATA
CACGGTAAGC ACGGTTACGA GGTGCCGGTG AACAAGCTGT TCAACGAGGT GACGCCGGCC
GATTACGCGG TCCTGGTACT CCCTGGCGGC AAAGCGCCCG CGGCCATCCG CAACAGCCCG
GCGGTCCATG AAATCGCCCG CGCCTTCATG TCGGCGTCCA AACCAGTGGC CGCCATCTGC
CACGGCCCGC AGATCCTGAT CTCCGCCGGA CTGCTCAAGG GGCGCAAGGC GACCTGCTAT
GAGTCGGTGG CCCCTGAACT GCGGGACGCC CAGGCGCAGT ACCAGGATGT CGAGGTGATA
GTGGACGGAA ACCTGATCAC CTCAAGAAAA CCCGACGATC TGCCCGCCTT CTGCCGCGAG
TTGGTGCGTA TGGTCAAGGC GGCTGCGTAA
 
Protein sequence
MKALILSADN FEDTELLVPL YRLREAGYAV DVASEKAGSI HGKHGYEVPV NKLFNEVTPA 
DYAVLVLPGG KAPAAIRNSP AVHEIARAFM SASKPVAAIC HGPQILISAG LLKGRKATCY
ESVAPELRDA QAQYQDVEVI VDGNLITSRK PDDLPAFCRE LVRMVKAAA