| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_4005 |
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| Symbol | |
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| ID | 6780869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 4547486 |
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| End bp | 4548649 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642770000 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002140793 |
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| Protein GI | 197120366 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAA GCAATTTGGT GTTGGCGGCC CTGGGAGCCA CCCTGCTGCT GGGTGGCGGG
ACCGGCTGCT CCGGCAAAAG CGAGGCGAAA GTCCCCGCGG GAGCACCCCT CATCGCGGTG
GAAGTGCTGC CGGTAAAAGG GAGCGACCTT ATTGACGGCA TCGACGTGAC CGGGACGCTG
GCGGCCAAGA ACGAGGCCGA GGTGAAGACC GAGATACCGG GCCTTGTCAA GGAACTTTAC
GTGACCGAGT GGGTCCGGGT TCGCAAGGGG CAGCCTCTGG CGCGCATAGG GCTTGCCGAG
ACCGAGGCGC TGGTGAAGCG CGCCGAGGCG AACGTGCAGA ACGCCAGGGC GTCCCTCATC
CAGGTCAAGG TGGCGGCCGA CAGGAGCGAA CGCGAGAAGG AGCGCCAGAT TAAGCTGAAG
CAGGCGGGGC TCGCCACGCA GCAGTCGGTC GACGACGCCG TTTCCGATTC CGAGGCGGCC
AAGGCCAGGA TCGAGGCGGC CCGGGCGCAG ATCCGCGCCG GCGAGGAGGA ACTCTCCCAA
TTGCGGGTCA GGCTCTCCAA GGGGATGGTC CGCTCCCCCA TCGACGGGGT AGTCGCCTTC
AAGGACGTGA ACGTCGGCTC GCTGACGAGC GACGCGGCCG CCGCAAAGCC CATCTTCAAG
ATCGTCGACA ACAGGCTGAT GAACCTGACC GTCACCGTCC CCTCCTCGCA GATGGCTGCG
GTGAAGCTCG GCCAGCCGCT GCAGTTCGTA ACCGACGGTG TCCCCGGTAA AACCTTCACC
GGCAAAGTCA TGTTCATAAA TCCTTCCGTT GAAGAGGCCG ATCGCTCGCT CAAGGTGATA
GCCGAGGTCC CCAACGTTCC GGAAGTGCTC AAGGGGGGGC TCTTCGTCAA AGGGAAGATA
GTCACCGGCT CCCGCAAGGA CGTACTGCAG GTGCCGCGCG CGACGCTGGC GGCCCTGGAT
CTCGACCGGC GCTCGGGCTA CCTCTTCGTC GTGGAAAACG GTGTCGCCCG CAGGCGCGAG
GTGGCTACCG GCGCGGTCTC GGGGGAGCTG GTCGAGATAC TCTCCGGCGT CAAGGGCGGC
GAACAGGTCA TCGGCCGCGG CGGATTCAAC GTAAAGGACG GCGACCGCGT CCAGGTGGCG
AACCTCCCTT CTTCCAGGCC CTGA
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| Protein sequence | MKTSNLVLAA LGATLLLGGG TGCSGKSEAK VPAGAPLIAV EVLPVKGSDL IDGIDVTGTL
AAKNEAEVKT EIPGLVKELY VTEWVRVRKG QPLARIGLAE TEALVKRAEA NVQNARASLI
QVKVAADRSE REKERQIKLK QAGLATQQSV DDAVSDSEAA KARIEAARAQ IRAGEEELSQ
LRVRLSKGMV RSPIDGVVAF KDVNVGSLTS DAAAAKPIFK IVDNRLMNLT VTVPSSQMAA
VKLGQPLQFV TDGVPGKTFT GKVMFINPSV EEADRSLKVI AEVPNVPEVL KGGLFVKGKI
VTGSRKDVLQ VPRATLAALD LDRRSGYLFV VENGVARRRE VATGAVSGEL VEILSGVKGG
EQVIGRGGFN VKDGDRVQVA NLPSSRP
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