Gene Gbem_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3856 
Symbol 
ID6780720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp4395441 
End bp4396259 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID642769851 
Producttriphosphoribosyl-dephospho-CoA protein 
Protein accessionYP_002140644 
Protein GI197120217 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1767] Triphosphoribosyl-dephospho-CoA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTCTG AGCTTCCCAC GCTCTCCCTG AACCTGGTGC GCGGCGCCTT CATGGAGCTC 
TACCTTACCC CCAAGCCGGG ACTGGTCGAC CTGAACGATT CCGGCTCCCA CCGCGACCTC
ACGCTGCACC GGATGGAAAC CTCCCTGAAG ATCGTTTCCG CTTACCTCGC CGAAGTTGCC
GACAGCCTCG CGCGGGGGGA GGAGCTGGCC GCCCAGGTGC GGCTCGGGGT GGCGGCGGAG
GCAGCGATGC TTCAGAGGGC GGGGACCAAC TGCCACAAGG GGTACATCTT CCTCTCCGGG
CTCCTCCTTT GCGCCGGCTC GCAGGTGGCG CGCCGCGACG AGGGGGAGCT CAGCGCCGCC
GTGGGGCGCC TGGCCAAGCG CTTCTTCGAC CGTCCGCACC CCCAGCCGAC CAACGGAAGC
CGCATCCGCA ACAGCTCCGA GGCACAGGGG GTGATGGGGG AGGCGCTGGC GGGGTTCCCC
TCGCTCTTCG GCGCCGCACT TCCCGCCTTC AGGCACGAGA TCGCCAGGGG CGGAAACCGC
GGCACGGCGG TCTACGCGAT GCTTGGGCGC CTGATGGCCA CCGTCGAGGA CAGCACGTCC
CTGCACCGCT GCGGCAGGGA AGGGCTCGCG ACGGTCAGGG AGGACGGGCG GAAGCTGGAA
CTCCTGGTGC TGCAGCGGGG CGACTTCCTC GGTTTTCTTG CCGAAAGGAA CGAGGCCTAC
ATCAGCCGCA ACTTGACCAT GGGAGGGGTC GCCGACCTCC TTGCCCTCTC CTTCGCCTGG
CTCGCCCACA CCGGCGAGCT TGATCTCGCC GCTTCCTGA
 
Protein sequence
MRSELPTLSL NLVRGAFMEL YLTPKPGLVD LNDSGSHRDL TLHRMETSLK IVSAYLAEVA 
DSLARGEELA AQVRLGVAAE AAMLQRAGTN CHKGYIFLSG LLLCAGSQVA RRDEGELSAA
VGRLAKRFFD RPHPQPTNGS RIRNSSEAQG VMGEALAGFP SLFGAALPAF RHEIARGGNR
GTAVYAMLGR LMATVEDSTS LHRCGREGLA TVREDGRKLE LLVLQRGDFL GFLAERNEAY
ISRNLTMGGV ADLLALSFAW LAHTGELDLA AS