| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3770 |
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| Symbol | |
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| ID | 6780634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4306634 |
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| End bp | 4309126 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769765 |
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| Product | helicase c2 |
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| Protein accession | YP_002140558 |
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| Protein GI | 197120131 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGT CTTTCTCCGA TCAGGCCATC CAGCAGCTCC GCAGCGCAAT CGACGAGGCA
AACGGCAACG AAGTCTTCTT CCTTGGGCGG ACCGACGAGG CGCGCATCGT CGTTGAGGTC
GAGCCCCTGG CGCGCGGCAA CCGCGACGCG GTACCCGCCA TCATGATCGC CTGCTCCTTC
GGCGACGTGG TGATCCACAA CCACCCATCA GGCAACCTCA CCCCCTCCCA GCCCGACATC
GAGATCGCGT CGCTCTTGGG AAACCAGGGG GTGGGCTTTT ACATCGTCAA CAACCAGGCC
GACCGCTGCA ATCAGGTCGT CGCCCCCTTC TCCCGCAAGG TGGTGGAATC GCTCTCCTAC
CCGGAGATCG AGCGGTTCTA CGCGCCGGAC GGGGTGCTGT CGCAGGCGCT CCCCGGCTAC
GAGCACCGCC CCGAGCAGAC CCGGATGGCG CTAAACCTCT CCGAGGCGTT CAACGACGAG
AAGGTCGCCG TGGTCGAGGC GGGGACCGGG ACGGGAAAGT CGCTCGCCTA TCTCCTTCCG
GCGGCGCTTT GGTCGGTGCG CAACAAGGAA CGGGTGGTGG TATCCACCAA CACCATCAAC
CTCCAGGAGC AGCTGATCCA GAAGGACATC CCCTTCCTGC AGCAGCACGC CCAGATCAAG
TTCCGCGCCG TCCTGGTGAA AGGACGCGGC AACTACCTCT GCCTCAGAAA ACTCCACGTG
AACGCCGCCG ACGCCTCGCT TTTCAAGGAC GAGACCGCGC GCGAGCTCGA CGCCATCGTC
TCCTGGAGCA AGAAGACCGA CGACGGCTGC CGCTCGGACC TGGCCTTCAT ACCGAAGGAT
GAGGTCTGGG AGGAGCTTTG CTGCGAGTCG GATCAGTGCG GCCGGGTGAG GTGCCCCGAT
TACGCCCGCT GCTTCTTCTA CAAGGCCAGG CGTGAGGCTG CCGGCGCCGA CCTCCTGGTG
GTGAACCACG CCCTGCTTTT GGCCGACCTT TCCGTGCGTC AGGAAACAGG CTACGACGCA
ACCGCCATCC TCCCCCCGTT CCATCGGCTC ATCTTCGACG AGGGGCACCA CCTTGAGGAT
GTTGCCACCA ACTTCCTCTC CAGCCAGGTC TCGCGCCTGG GGCTCGTCAA GCTCCTGGGG
AAACTGCAAC ACCCCAAAAA GGCGCACCGC GGCATCCTGC CGCAGCTCTC TTCCCTCCTT
TCGTCCGCCG TCCCGGATGA CCAGGACGAC ATCTACCTGG AGATCGCCGA GGTCCTCGAG
GACCGGCTGA TCCCGAGGAG GGTGTCCGTA CTCGACGCGG TGACCCGGGG GATGGATGTA
ATCGGCGAGT CCCTGTTCCA AAAACTCAAG AAGGAGGCGG GCGAACAAAA GCTGCGGGTA
ACCCCCGCCT TGTACGGGAC GCCGCTTTGG CAGGAGGTGA CCGAACAGGT CGAGATCATG
TGCCAGGCGC TCTCCGAGTA CGCGCTCGCC ATGCAGACCT TCCTGAAGCA ATGCGAGAAG
CTCTCCGACA AGGTGCTGGA GAAGCTCGCC GGGCCGCTCA CCGACCTTCG GGGGGTGAAG
GGGCGGGTGG AATGCGCGGT CGACGCGCTC CGCTTCTTTA CCGCGCGCGA AGAGGAGCAC
TGCCGCTGGT TCGAGCTGAG GAAAGGCCCC CTGGTAAAGC TCTGCTGCTC GCCGCTGGAA
GTGGCCGAAT CGATCAAGAA AGCGATCCTG GACCGCTTCA AGACCGTGGT GCTCACCTCG
GCCACGCTCG CGGTGGGGGA AAAGTTCGAC TTCTTGAAGC GCAGGACGGG GATCGAGCTC
CTTCCCAAGG AGCGCGTCAG CACGCTGCTT CTCCCCTCAC CCTTCGACTA CGCCCGGCAG
GCGCTGGTCG GCGCCCCCTC GGACATGCCC GAGCCGACCT CGCCCCTTTT CGAGGGAAGG
CTTTGCGAGC TCCTTTTGAA GGCGCTCAAG ATCTCGCAGG GGCGCGCCTT CGTTCTTTTC
ACCTCGTACG ATCTGTTGAT CCGGGTCTTC AACCGCCTGG CGAAGCCACT CAAGGCCGCG
GGGCTCACCC CGATGCGCCA GGGAGAGACC AACCGCCACA TGCTTCTGTC CAACTACCGC
AGCGCGGTCA ACCCGGTCCT TTTCGGCACC GATTCCTTCT GGGAAGGGGT GGACGTGCAG
GGGCGTGGGC TGGAGCTGGT GGTCATCACC CGGCTTCCCT TCCGGGTTCC GACCGAGCCG
ATCCTGGAGG CGAGGAGCGA GCACATCGCG GCGCTGGGGG GAGATCCCTT CATGAGCTAC
ACGGTCCCCC AGGCGGTGAT CAAGTTCAAG CAGGGGTTCG GGAGGCTGAT CAGGAGCAAA
GAGGACCGGG GTGCCGTGCT GATACTCGAC TCGCGGGTCT TGACCAAGAA CTACGGGAAG
ATCTTCCTGA CTGCACTGCA CGGTGTCGAG GTGGTGCGGG GGGAAGAGGC GATGCTCTGC
GAGAAGCTGA AAGGGTTCTT CGGAAAACCT TAG
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| Protein sequence | MQKSFSDQAI QQLRSAIDEA NGNEVFFLGR TDEARIVVEV EPLARGNRDA VPAIMIACSF
GDVVIHNHPS GNLTPSQPDI EIASLLGNQG VGFYIVNNQA DRCNQVVAPF SRKVVESLSY
PEIERFYAPD GVLSQALPGY EHRPEQTRMA LNLSEAFNDE KVAVVEAGTG TGKSLAYLLP
AALWSVRNKE RVVVSTNTIN LQEQLIQKDI PFLQQHAQIK FRAVLVKGRG NYLCLRKLHV
NAADASLFKD ETARELDAIV SWSKKTDDGC RSDLAFIPKD EVWEELCCES DQCGRVRCPD
YARCFFYKAR REAAGADLLV VNHALLLADL SVRQETGYDA TAILPPFHRL IFDEGHHLED
VATNFLSSQV SRLGLVKLLG KLQHPKKAHR GILPQLSSLL SSAVPDDQDD IYLEIAEVLE
DRLIPRRVSV LDAVTRGMDV IGESLFQKLK KEAGEQKLRV TPALYGTPLW QEVTEQVEIM
CQALSEYALA MQTFLKQCEK LSDKVLEKLA GPLTDLRGVK GRVECAVDAL RFFTAREEEH
CRWFELRKGP LVKLCCSPLE VAESIKKAIL DRFKTVVLTS ATLAVGEKFD FLKRRTGIEL
LPKERVSTLL LPSPFDYARQ ALVGAPSDMP EPTSPLFEGR LCELLLKALK ISQGRAFVLF
TSYDLLIRVF NRLAKPLKAA GLTPMRQGET NRHMLLSNYR SAVNPVLFGT DSFWEGVDVQ
GRGLELVVIT RLPFRVPTEP ILEARSEHIA ALGGDPFMSY TVPQAVIKFK QGFGRLIRSK
EDRGAVLILD SRVLTKNYGK IFLTALHGVE VVRGEEAMLC EKLKGFFGKP
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