| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3409 |
|---|
| Symbol | |
|---|
| ID | 6780271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 3926017 |
|---|
| End bp | 3926910 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642769403 |
|---|
| Product | cell surface receptor IPT/TIG domain protein |
|---|
| Protein accession | YP_002140198 |
|---|
| Protein GI | 197119771 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGCA AACTGTTTTT CCTACTGCTG GTCCCCTTGC TCTTCCCGAT AGTAGCCGCG
GCACAGACGC CGGCGCCCCA AAAGCCGGCA GCTGTGACCC TCTTCCCCTT GAGCGTCCTT
TCCATCATCC CGGCACAAGG CGAACCCGGC ACCGCCGTCA CCCTGAACGG CACCGGCTTC
ACCACGGGGA CAGCCGTGTT CCTCGGGACC CGGCAGCTCC CGGCGACGCT GGTGGGAAAC
CGGCTGCTGA CCGTAGAGCT TCCCGACCTC CCCCCCGGCG TCTACGCGCT CTACCTGAAG
CGGGAGGACG GCAGCACCAG CAGGGCTTTC AACTTCGCGT TGCAGCCGCA AAAACCGGTC
GCGACATCCC TCTCCCCCGA CACGGTGACC GCCTGCTCCA CCGGCAGGGA GCGCGAGGTA
GCGGTAGCCG GCGCCAAATT CCAGCCAGGA GCCCGCGTCT TTTTGGACGG CGCCGCTCTC
ACCACCCGCT TCATTTCCCC GGCCGCGCTC TCCTTCACCG CCCCGGCGGT CGGCGCCGGC
CTGCACCAGG TGCAGGTAAA GAACCCTTCC GACGCGGGTT CCGGGGTACT GGCGCTTTTC
ATCGACGCGA AGCCGGAGAT AGCGAGCGTC ACCATCGGCC GGGAGTTCGT TAGCGCTTAC
GAGTTGGTCC TAACGGGGAA GAATTTCCAG CAGAGTTCGG TGCTGGTAGC GGACGGGAAA
AGGGTCGGGA CGGGAGAGCA GATAGCGACC GAGCGGGAGC GGCTGATTTA TTTGGGTTGC
AACCAGCTGG TCTACGAGCG CCACCCCTAC GACCCGACCC CAAAAGAGAT CCGGCTGCAG
GTAGTAAATC AAAACGGGGA GGAGAGCGCC CTGTTCACCA TCAGCGCCCC CTGA
|
|---|
| Protein sequence | MLRKLFFLLL VPLLFPIVAA AQTPAPQKPA AVTLFPLSVL SIIPAQGEPG TAVTLNGTGF
TTGTAVFLGT RQLPATLVGN RLLTVELPDL PPGVYALYLK REDGSTSRAF NFALQPQKPV
ATSLSPDTVT ACSTGREREV AVAGAKFQPG ARVFLDGAAL TTRFISPAAL SFTAPAVGAG
LHQVQVKNPS DAGSGVLALF IDAKPEIASV TIGREFVSAY ELVLTGKNFQ QSSVLVADGK
RVGTGEQIAT ERERLIYLGC NQLVYERHPY DPTPKEIRLQ VVNQNGEESA LFTISAP
|
|---|
| |