| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3401 |
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| Symbol | |
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| ID | 6780264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3915740 |
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| End bp | 3917926 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642769397 |
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| Product | glycoside hydrolase family 57 |
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| Protein accession | YP_002140192 |
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| Protein GI | 197119765 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAGC CACTTTACGT GTCGTTTCTC TGGCACATGC ATCAGCCTTT CTACAAGGAT
CCGGTCCGGG GGGAGTACGT CCTGCCTTGG GCCTACCTGC ACGCGGTGAA GGACTACTAC
GACATGCCCG CCATCGTCGA GGCGGTCGAA GGCGCCAAGG TGGTATTCAA CCTGGTCCCC
TCGCTTTTGG AGCAGATCCT CGACTATGCC GGGGGGGGCG CGGTGGATCC CTTCCTGCTG
CGGGCCCGCC CCTTGCCTGC CGAGCTGGAC GATAACGACC GGCTCTTCCT CCTCGAAAAC
TTCTTCTCCG CCAACCGGCA GCGCATGATC GAGCCCTACC CCCGCTACCG GGAGCTCTTC
GTCCGGGCCG GGGAGGGTGC CCCGGGCGCG GCGGCGCTGC GCCTTGCGTC CTTCGGCGAC
CAGGATCTAC TGGACCTCCA GGTCTGGTTC TATCTCGCCT GGACCGGCGA GGCGGCGAGG
CGGCGCTTCC CCGTCTTCAA GGAACTGATC CGCAAGGGGA GCCACTTCAG CCAGAAAGAC
AAGAAGCTTC TCCTGGAGAC GCAGCGCGAG CTGATCTCCC GGGTGATACC CCTTTACAAG
AAGCTGCATC AAGAGGGGAA GGTCGAGCTT TCTGTCACCC CTTATTTCCA CCCGATCCTG
CCGCTTTTGT GCGATTCGGG GATCGCGCGG GTCGCCCTTC CCAAGGCGAA CCTCCCCAGC
ATCCCCTTCC GCTACCCTGA GGACGCGAGG GCCCAACTGC TGCACGCGAT CGCCAGCTTC
GAAAGGCTCT TCGGCTTTCC ACCGACCGGG ATCTGGCCCT CGGAGGGATC GGTGAGCGAC
GAGGTGTTGG GCATTATGGC GCAGACGGGG CTTCCCTGGA CCGCCTCGGA CGAGCGGGTG
CTGGCCCATA CGCTGCCGGG TGGGCTGGAC CGGGAACGCG ATCCCTTGTA CCACCCGTAC
ACCTTCAGTA AGGACGAGCG CGAGATCTCG CTTTTCTTCC GGGACCAGGG GCTGTCGGAC
CTGATCGGTT TCACTTACTC GCAATGGGAG ACCGAAAGGG CGGTGGGGGA CTTCCTGGCA
CGGCTGAAGG AGGTCAGGCA GCGCAGCCGC CAGGCCTGCG TGGTGCCGGT GATTCTCGAC
GGCGAAAACG CCTGGGAATA CTACCAGGAC AACGGGTTTC CCTTCCTTTC CCGGCTCTAC
GCCGCCCTGG TGCAGGCCCC CGGAGTGCAA CTCGCCACGT TTTCGGAGGT GCTGCAGCGG
ACCGGCGAGC GGCGCGTATT GGAGCACGTC CACCCGGGTT CGTGGATCAA CGCCGACTAC
GGCATCTGGA TCGGCAAACC CGAGGAGAAC CTGGGGTGGG ATTACATCGC CAAGGCGCGT
GCCGCGGCGG TGCAGGGAAG CCAGGAGATG GCGACCCTTT TGGCCGGGGG GGAGAGCAGC
GACGAGGCCG CCCGGCAGGC GTGCATGGCG CTCTACGCGG CACAGGGGAG CGACTGGTTC
TGGTGGTACG GCGACGATCA CTTCTCCCCG CATGCAGGGA GGTTCGACCT GCTGTTTCGC
AGCCACCTGA TGAACGTCTA CCAGCTGCTG GCCCTGGAGG TTCCCGGGGA GCTGCGCCAG
CCGATAAAGA AAGAGCGCCC GGCCGGTTTC GTGCGCGCGC CTGCGGGGCT CGTCACCCCC
GCCATAACTG GTGTGGTGAA CGACTACTTC GAGTGGCTCT CGGCGGGGCT CTACGACCTG
ACCCGGCAGG GGGGCGCCAT GCACGCCGCC GACAACCTGC TGCAGTCCTT CTATTACGGC
TTCGACCTGG AGTACCTTTA TTTCCGTATC GACGGAGTAC AGCCGCTGGA AAAGACGTTC
AGGCCGGAGG ACAGGCTCTC GCTGCATCTG GTCTGCGGGG GCGAGTGGCG GCTCGACATG
CAGTTGGGGG AGGGGGAGGG GGAGTTGCAG GTGCTTAAGG ACGGAGCCTG GCTTGGCAGC
GGCAGTATCG GCCGCTACTG CATGGGGCGC AGCGCTGGAG CGCGCGTGCC CCTGCCTCCC
TTAAGGCTCG AAGGGTCAGG GACGGTGCTT TGCTATCTCT GCGTCACCCG CGCCGGGACC
CAGGTCGGAC GCTGGCCGGC CGACGCCGCA CTCCCCTTGG TTTCCTCCGG GCCGGAACTC
GGATGCGAGG CTCATTATAA TTATTAA
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| Protein sequence | MTEPLYVSFL WHMHQPFYKD PVRGEYVLPW AYLHAVKDYY DMPAIVEAVE GAKVVFNLVP
SLLEQILDYA GGGAVDPFLL RARPLPAELD DNDRLFLLEN FFSANRQRMI EPYPRYRELF
VRAGEGAPGA AALRLASFGD QDLLDLQVWF YLAWTGEAAR RRFPVFKELI RKGSHFSQKD
KKLLLETQRE LISRVIPLYK KLHQEGKVEL SVTPYFHPIL PLLCDSGIAR VALPKANLPS
IPFRYPEDAR AQLLHAIASF ERLFGFPPTG IWPSEGSVSD EVLGIMAQTG LPWTASDERV
LAHTLPGGLD RERDPLYHPY TFSKDEREIS LFFRDQGLSD LIGFTYSQWE TERAVGDFLA
RLKEVRQRSR QACVVPVILD GENAWEYYQD NGFPFLSRLY AALVQAPGVQ LATFSEVLQR
TGERRVLEHV HPGSWINADY GIWIGKPEEN LGWDYIAKAR AAAVQGSQEM ATLLAGGESS
DEAARQACMA LYAAQGSDWF WWYGDDHFSP HAGRFDLLFR SHLMNVYQLL ALEVPGELRQ
PIKKERPAGF VRAPAGLVTP AITGVVNDYF EWLSAGLYDL TRQGGAMHAA DNLLQSFYYG
FDLEYLYFRI DGVQPLEKTF RPEDRLSLHL VCGGEWRLDM QLGEGEGELQ VLKDGAWLGS
GSIGRYCMGR SAGARVPLPP LRLEGSGTVL CYLCVTRAGT QVGRWPADAA LPLVSSGPEL
GCEAHYNY
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