Gene Gbem_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_3300 
Symbol 
ID6780158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp3794649 
End bp3795299 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID642769292 
ProductCBS domain containing protein 
Protein accessionYP_002140092 
Protein GI197119665 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.490249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGTTC GAGACCGGAT GACTCCAAAC CCCATAACCA TCACGCCTGA TATCTCGGTG 
ACTGAAGCGC TGCGCCTCAT GGGCGACAAG AAGATCCGGC GCCTCCCCGT GGTGGAGCGT 
ACCGGAAAGC TGGTGGGGAT CGTATCCGAC CGCGACCTGT TTCAGGCTTC CCCCTCGCCG 
GCGACCTCGC TGGCGATCTG GGAGATTCAC GACCTGCTGG CGAAGCTCAC GGTCGACAAG 
ACCATGGCCA CTGACGTCAT CACGGTTACC GAGGACACCC CGCTGGAAGA GGCGGCCCGC 
GTCATGGTCG ACCGCAGGAT AGGCGGCCTT CCGGTAATGA AGGGTGACGC GCTGGTCGGC 
ATCATCACCG AGAGCGACCT GTTCCAGGCG CTTTTGGAAC TGCTGGGAGG GAGGCGGCAC 
GGGGTGCGCC TCACCGTCAC CACCACCGGC GCCAAGGGGA CGCTGGCCGA CGTGGCCCAG 
ACCATCTACC AGGCCGGCGG CGACATCGTG GGCCTTGGCT TCAGCGAGGT GGACGGCGGC 
ACGAGCGACA CCTGGGTTAA CACCTTCAAG GTGCAGGGGG TAGACAAGGA CAAACTGGTA 
GAGGCGATCC GGCCGCACGT GCGCGAGATC AAGGACGTGC GCGAGACCTA A
 
Protein sequence
MLVRDRMTPN PITITPDISV TEALRLMGDK KIRRLPVVER TGKLVGIVSD RDLFQASPSP 
ATSLAIWEIH DLLAKLTVDK TMATDVITVT EDTPLEEAAR VMVDRRIGGL PVMKGDALVG 
IITESDLFQA LLELLGGRRH GVRLTVTTTG AKGTLADVAQ TIYQAGGDIV GLGFSEVDGG 
TSDTWVNTFK VQGVDKDKLV EAIRPHVREI KDVRET