| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3145 |
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| Symbol | |
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| ID | 6780004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3630751 |
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| End bp | 3631455 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642769142 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_002139943 |
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| Protein GI | 197119516 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGC CCTGGCAAGT ATTGCAAAGC GTAAAGACCG CCGACGGCGT GCTGGAACTG
AGACAGCGCG GCGAGAGCGA TTTCCTGATC ACCGTGAACG GGCTGGTGCT GATGAACAGC
TCGCTGCACC GCTCCGAAGT AGCGCTGGGG GAGCTCGCCT GCGGCCACCT GAAACAGCAG
GAGGCGCCGC GGGTGCTGGT GGGGGGGCTG GGGATGGGGA TCACCCTGAG GGCGGTCCTG
GACAACCTCC CGCCCAAGGC CACGGTCGTG GTGGCGGAGC TGAACCCGGT GGTGCTTGAG
TGGTGCCGGG GTCCTTTGGC TGCGGTGACG AACCAGGCCG CCAGCGACCC GCGGGTGACC
GTGGAGATAA CCGACGTGGC CGACGCCATC AGGAAAAACG CCATGGGGAG GTCGCGTTTC
GACGCCATCG TGCTCGACCT GTACACCGGG CCGCACGCGA AGACGCACAA GATCGAAGAT
CCTCTCTACG GCGCCATCGC CATCGAGATG ACCCGTGCCG CGCTGAAACC GGGCGGGATC
TTCGCCGTGT GGGGCGAAAA CTACGACCAG GGATTCGACA AGCGGCTGCG CGCTGCAGGC
TTTTCCGTCA CCTGCGACCG TCCCGGCCGC GGCGGACTGC GCCACGTGGT CTACCTCGCG
CGGGTGCAGC AGCGGTCGGA ACCTGGACGG CAGGGGAAGC GCTGA
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| Protein sequence | MAQPWQVLQS VKTADGVLEL RQRGESDFLI TVNGLVLMNS SLHRSEVALG ELACGHLKQQ
EAPRVLVGGL GMGITLRAVL DNLPPKATVV VAELNPVVLE WCRGPLAAVT NQAASDPRVT
VEITDVADAI RKNAMGRSRF DAIVLDLYTG PHAKTHKIED PLYGAIAIEM TRAALKPGGI
FAVWGENYDQ GFDKRLRAAG FSVTCDRPGR GGLRHVVYLA RVQQRSEPGR QGKR
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