| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3130 |
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| Symbol | |
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| ID | 6779989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3614472 |
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| End bp | 3615563 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642769127 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002139928 |
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| Protein GI | 197119501 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACC AGGACAGTTT TCGCGACAAG GAGTTGGTGC AGGGGCTGGC GCGACGCATC
GCCGAGCTGA CCCGCGGTAG GAAGAAGCCG CTGGTGTTCA TGGAGGTCTG CGGCACGCAC
ACCATGGCGA TCTACCAGTA CGGGTTGAGG AGCCTCCTGC CGCCGGAGGT TAAGCTGATC
TCCGGGCCCG GCTGCCCAGT ATGTGTCACC CCCAACGGCT ACCTGGACCG GGCCATCGCC
CTGAGCCGGC TCCCCGACCT CACCATCACC ACCTTCGGCG ACATGCTCCG GGTCCCCGGT
TCCAGTTCCT CGCTGATGGA GGAGCGCGCC AAGGGAGCCG ATATCCGCGT CGTCTACTCG
CCGCTGGACG CGGTGCGGAT CGCCGCTGCC AATCCGGCTA AACGGGTGGT CTTTCTCGGC
GTCGGTTTCG AGACCACCGC GCCCACCGTG GCCGGGAGCA TCCTGGCCGC CAAGGCGCAG
GGGCTCTCCA ACTACTTCGT GCTCGCCTCG CATAAGACCA TGCCGCAGCC GATGGCGATC
CTGTCGGCCG ACCCGGATCT CTCGGTCGAC GGCTACATCT GCCCGGCCCA CGTCAGCGCC
ATCATCGGGG CCGACGCCTA TCGGTTCCTG TGCGCCGAAT ACCAGGTCCC CTGCGTGGTG
ACGGGGTTTG AGCCGACCGA CGTGATGCAG GGGGTGGAGA TGCTGGCGCG CCAGGCACTG
CAAGGGGAGA GCCGGGTGGA GATCCAGTAT TCGCGGGTGG TCAGGTGGGA GGGAAATGCC
AAGGCGCAGG GCTTGCTGGC GGAGGTTTTC ACCCCCTTTG ACGCCCCGTG GCGCGGCATC
GGCGTCTTGC CCGGCAGCGG CCTCAGGATC GCCGACGCCT ACGGCGAATT CGACGCCGAG
CTTGCCCTCC CGGTGCAGGT AGAGGAGCTG AAGGAACACC AGGGATGCCT TTGCGGGGAG
ATCCTGAAGG GGAAGGTGGC GCCCGGCGAC TGCCCGCTCT TCGGCGGCAA GTGCACCCCG
GAATCGCCCG TCGGCGCCTG CATGGTCTCC AGCGAGGGGA CCTGCGCCGC CGCCTTCAAA
TACGGACGTT AG
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| Protein sequence | MNYQDSFRDK ELVQGLARRI AELTRGRKKP LVFMEVCGTH TMAIYQYGLR SLLPPEVKLI
SGPGCPVCVT PNGYLDRAIA LSRLPDLTIT TFGDMLRVPG SSSSLMEERA KGADIRVVYS
PLDAVRIAAA NPAKRVVFLG VGFETTAPTV AGSILAAKAQ GLSNYFVLAS HKTMPQPMAI
LSADPDLSVD GYICPAHVSA IIGADAYRFL CAEYQVPCVV TGFEPTDVMQ GVEMLARQAL
QGESRVEIQY SRVVRWEGNA KAQGLLAEVF TPFDAPWRGI GVLPGSGLRI ADAYGEFDAE
LALPVQVEEL KEHQGCLCGE ILKGKVAPGD CPLFGGKCTP ESPVGACMVS SEGTCAAAFK
YGR
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