| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3057 |
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| Symbol | |
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| ID | 6779913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3539335 |
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| End bp | 3542388 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642769051 |
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| Product | cytochrome C family protein |
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| Protein accession | YP_002139855 |
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| Protein GI | 197119428 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01904] Geobacter sulfurreducens CxxxxCH...CXXCH domain
[TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAT TCATAGCAGC GTTTTGGTTA ATACTGCTGA CGATCTCGAC TGCCTCTGCA
ATCGAGTCGC CGCACATATC CAATATGTCC TGCTCGGGGA CCCTGGGGTG TCATACCATA
GCGCTCATCG ACGGCGTCTA CGTAGCGACG CTCGTCGACG CCTACGGCGT CAACAACCTT
TGCCTTAAGT GCCACAACCC GCAGACGATG GCGCGCGGGT TCTCGGCCAG CGACATAGCG
AACCCGTTCG GGTCAACCGA CACGGGGCTC TTTCCGTCCG AGCAGTTGCA GACCTCCCAC
AACTGGGCCG GACCGGTCAA TATGCCGGCC GCAGGAGCCC AAATCTCGAC AGATCCTGCG
ATACTGGCGC TTCGGCCCAC GAAGGCTGGA GTCATCGGTT GCACAAGCTG CCACAATCAC
CACTCCTTCA CCGGAGACCT GCTGCTGAGA CGCCCCGGTG ACACCCTTTG TCTCGACTGC
CACCGCCAGC GCAACCAGCG CGATGTCCAA ACCGGCACCC ATCCGGTCAA CTTCAACTAC
ACGAGTGCCA CCTCCAAGGT AAAGCTGACA CCGGCGAAAT TCTTCAAAGA CCCAGTCAAC
GCCAATCCGG CGAACTCGAC TTCCGCCATG CTGTTCCCGA GTGGGAAGCT CGTCTGCACC
ACCTGCCACG CCCCTCACTA CGCCGACTCC AACGCACGCA CATTCGACAA CGCTTCCTCG
TCGACCTTCG GACTTCTTTC TTCATCACGA GGACGGCTTT TGCGCACAGA CGTGAGGGGG
GGGAGCGCCA ATGAGGTGAA CATCTGTACC AACTGCCACG CCGGGAAGCG GGCGCATAAC
GGCAAGGGAC AGAACATCCA GTGCGCCGAC TGCCACGCCG CCCACGTAGA CCCCCTGGAC
GGCACCGCGC CTAACGTCTG GCTGGTGCGC CGCTACATGA ACCCGCTGAC CACCAACACG
AAGGTCCTCA ACCAGTACAA GGACGCAGGG AGCAACTGGG CCGGCCCCGA CGGCGTCTGC
GTCGCCTGCC ACGCCATCCC GGCTCCGGGA GGGAACTATC CCCCCGAACA CACAAGCACC
GACCCCAACG TCTGCCGCAG CTGCCATGTC CACGACAGCG CCGACGGCTC CTTCGCGGCC
GGGTGCAACT CCTGCCACGG GAACCCGCCG CAGATAAACG CTGCCGGCCC GAGCGGCTAC
GCCAGCAGCG GGAGCTCCAA CTACGCTACC AGCGGCGTCT TCAAGGACGA GTCGCTCACC
CCGCACCTGG CCCACACCAG CAGGGGATTA ACCTGCGCTG CCTGCCACTC CGGGAACCAG
CACGCCAGCG GCGATTTCCA GCAGGTGTTC AGGACTCGTT CCGGCACGGC GGCCTACTAC
GGCGCCACTC CGAGCTACGA TCCGACCGGC TCGGGGAGCT GCCTCACCAA CTACTGCCAC
AGTAACGGCG CTCCTTCGAG TGTCCCCCCG GTTTACAAGA CCGCGACCTG GGCACTCGGC
AAGAACAGCA TCGTCGGCAC CCCCGGGGAG TGCTCGGCAT GCCACGACGC GGCCCCCGGT
ACCAACGCCC ACACGGCTCA CCTTTCGCGC GGCTACAGCT GCACGCTCTG CCATGCCGCG
ACTGCAGCCT CCAACAGCAG CATCAAGGAC GCCTCAAAGC ACGTGAACGG GATCAAGGAA
ATGTCCTTCT CCGGCGCCGC ACTAGGTACC GAGATCGACG TCTCCGACAC CTGCACCACG
AGCTACTGCC ACTCAAACGG TAGAGGGGTC TACTCCTCCC CCAACTGGAC CATGAAGGCT
ACCGGCGCGT GCGGCACCTG CCATGACACG GCCACCGGTC TCGGCAGCCC GCTCATCGCA
AGCGGCGCCC ATTTCGCGCA CTTCAGCACC TCGGCTGCCG CCTACGGGCC GATGCTGACC
ACGCAAAACT CGACCGGCTG CCAGGCCTGC CACAACGTGA GCAGCGCCAA CCACGTCAAC
CAGAGCATCG ATCTCAACGG CACGCTCGGC TACCAGCGCA ACGGCACCGG CACCTGCACC
CCCTGCCACG CGACGCAGGT GAACTGGAAC ATCGGAGCGG TAACCTGCGA GAGCTGCCAC
ACCGGAACCC TGTCGGTGAT AAACGGGGTC CCGGCACCCA ACAAGAGCCT GGCGGCAACG
CTCGGCCACG GCGCCCCGGC GATAGGGAAG GGGTGCACCG CCTGCCACGA GCGCAACGCG
CGGCACATAA ACGGCGGTAG CCGCCTTCAG GCGCAACTGA GCGGCAGCCT CAACGCCGAC
TGCAGATACT GCCACGACAA CTCCTCGGTG GTGGTTGCCG AAGGCTTCCG CAACATGAGC
ACCCACTTCC TGGCCAAGGG GGGGAGCCAG GCCATGGCCT GCGCCCAGTG CCACGATCCG
CACGGCTCGA CCAACCTGCA CATGATCAAA ACCGTCATCA ACGGCAAGAC CATCGTCTTC
AACGATGCGA TGACGGGGCT GGTGAATACC TCGACCAACC AGGGCCTTTG CCAGGTCTGC
CACACCCAGA CCAGCCACTA CCGCGCCGGC GTGCCGGAGA CCGCACACCC GACGACAAAC
TGCCTCTCCT GCCACGACCA CCGCGCAACC GGAGGCGCCT TCAAGCCCAC CGGGACCTGT
GACGCCTGCC ACGGCTACCC GCCTGCACCC AAGGCGACCA TCACGCCGCA GCTCTTCGGC
GTGCAGGGAA GCTGGTCCTC GGCGCGCTAC GAGGATTACT CCGGCGGTGG CGGCGCCCAC
CTGGTGGCCG CTCACGTGTC GCCCAACGCC AAACCGAGCG AGGGGTGGAG CAACTGCGCC
ATCTGCCACA ACGGCGGTTT CACGGACTCC CGTAACCATA AGATGACGAT GCCGCTGAAA
GGGAACATCG AGAACGTCGA TGTCGTCGTC GATCCCAAGT ACCGCTTCTC CACCGGTTTC
ATCATTTACA CCGGGGCTAA AAGGGTGAGC GCCCCGGCTG AAAACGTGAC CGGGAGCTGC
TACAACGCGA GCTGCCACAT CACCAAGTCC CGGCGCTGGA GTATCGAAAG GTAA
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| Protein sequence | MKRFIAAFWL ILLTISTASA IESPHISNMS CSGTLGCHTI ALIDGVYVAT LVDAYGVNNL
CLKCHNPQTM ARGFSASDIA NPFGSTDTGL FPSEQLQTSH NWAGPVNMPA AGAQISTDPA
ILALRPTKAG VIGCTSCHNH HSFTGDLLLR RPGDTLCLDC HRQRNQRDVQ TGTHPVNFNY
TSATSKVKLT PAKFFKDPVN ANPANSTSAM LFPSGKLVCT TCHAPHYADS NARTFDNASS
STFGLLSSSR GRLLRTDVRG GSANEVNICT NCHAGKRAHN GKGQNIQCAD CHAAHVDPLD
GTAPNVWLVR RYMNPLTTNT KVLNQYKDAG SNWAGPDGVC VACHAIPAPG GNYPPEHTST
DPNVCRSCHV HDSADGSFAA GCNSCHGNPP QINAAGPSGY ASSGSSNYAT SGVFKDESLT
PHLAHTSRGL TCAACHSGNQ HASGDFQQVF RTRSGTAAYY GATPSYDPTG SGSCLTNYCH
SNGAPSSVPP VYKTATWALG KNSIVGTPGE CSACHDAAPG TNAHTAHLSR GYSCTLCHAA
TAASNSSIKD ASKHVNGIKE MSFSGAALGT EIDVSDTCTT SYCHSNGRGV YSSPNWTMKA
TGACGTCHDT ATGLGSPLIA SGAHFAHFST SAAAYGPMLT TQNSTGCQAC HNVSSANHVN
QSIDLNGTLG YQRNGTGTCT PCHATQVNWN IGAVTCESCH TGTLSVINGV PAPNKSLAAT
LGHGAPAIGK GCTACHERNA RHINGGSRLQ AQLSGSLNAD CRYCHDNSSV VVAEGFRNMS
THFLAKGGSQ AMACAQCHDP HGSTNLHMIK TVINGKTIVF NDAMTGLVNT STNQGLCQVC
HTQTSHYRAG VPETAHPTTN CLSCHDHRAT GGAFKPTGTC DACHGYPPAP KATITPQLFG
VQGSWSSARY EDYSGGGGAH LVAAHVSPNA KPSEGWSNCA ICHNGGFTDS RNHKMTMPLK
GNIENVDVVV DPKYRFSTGF IIYTGAKRVS APAENVTGSC YNASCHITKS RRWSIER
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