Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_3047 |
Symbol | |
ID | 6779903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3515509 |
End bp | 3516903 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642769041 |
Product | type VI secretion protein, VC_A0114 family |
Protein accession | YP_002139845 |
Protein GI | 197119418 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCCAA TCGAGAGGCC CGTATTCTGG CACCAGGGGC TGTTTCTGCG GCCCCAGCAT TTCCAGTTGT CAGAGCGCTC GTTGCAGTCG CAACTGGCTC CGTACCAGTT GTGCCTCATG CCGGACTTTT GGGGCGTGCA ACGGATGGAG ATCAGGTGCA CGGCCGGCGG GATACCTAGC CTCGAAATCT CCGGCGCCTT CCTTTTTCCC GACGGCACCT ATGCCGTCGT CCCAGATAAC GCGCGGGTCG AGTCCAGGCC GGTCCTGGAA GTGGCACTGG CGGGAAGGGA TTCCTGCACC GTCTACCTTG GCCTGAAAAA GTGGAGCCCC GCCGGCCATA ACGTCGCCAC CTTGCTCCCT GGCGACCCCC TCTCCAAGGT CGCTACGCGG TTCGTTGCCG ACTCAGACGC CCCGCCCCGT GCCGATCTCC ACGCAGGGGG GGCTCAGGCG GAGGTGCGGC AGATGGCCTT GGCCCTGCAG CTTTTCTGGG AGAGCGAGTT GGAGTCGTTG GGGGATTACC TGCTCATCCC TGTCGCCCGG CTCGCGCTGC GCGGCGAAAC TGCCGTGCCT TCCCGTGACT TTATCCCCCC CTGCATCACC CTGGCGGGCT CACCCGCGCT CCTCGACCTG CTCCAGGAAA TCCGGGAACA GCTGGCCTCA CGCTGCCGCT GGCTGGAGGG ATACAAGAAG GAACGCGGCA TTCAGGCGGC CGAGTTCGGT TCCAAGGATC TGGTCTTCCT CCTAGCCCTC AGAACCGTGA GCCGGCACCT CGCCAGGCTT AGCCACTGGA TCGAGGCGGT TGAGGTTCAC CCTTGGCAGG TTTACGGGCT TTTGGGGGAG CTCGCCGCGG AACTCACCTG CTTCTCGGAG AGCATCGGTG CCTTCGGTGA GTCCGTAGCC GACGGGGGAA GGCTCATGCC GCAGTACCGG CACCAAGAGC TGGCGTGGAG CTTTCGGCTG GCCCGTGATC TCATCGTCCA GTTGCTGAAC GAGGTGACCG CGGGGCCGGA ATACGCCCTG ACCCTCGCCT TCGACGGGAC CTGGTTCGCC TCCGATCTCA AGCCCGCGCA CTTCCAGGGT CACAGCAGGT TTTACCTGGT GCTGAATACG AACGAGGATC CGAAACTCGT CCTGGCTTCG GTCGCGACCG CAGCGAAATT GACCGCACGC GAACGGCTGC CGCTGCTGAT CTCCCAGGCG CTCCCGGGGA TCGCCCTGGA GTATATTCCC GATCCCCCCC GCGAACTGCC GCACCGCTCG ACCTCCCTCT TTTTCAGCAT AGACAGCCGC TGCGATCAGT GGAAGCTGGT GCAGAAGTGG AACAACATCG CCCTCAGCTG GGACCAGGCC CCAGCTGACC TAGAAGTGCA GGTCATGATC GTTGCCAGGT CCTAG
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Protein sequence | MMPIERPVFW HQGLFLRPQH FQLSERSLQS QLAPYQLCLM PDFWGVQRME IRCTAGGIPS LEISGAFLFP DGTYAVVPDN ARVESRPVLE VALAGRDSCT VYLGLKKWSP AGHNVATLLP GDPLSKVATR FVADSDAPPR ADLHAGGAQA EVRQMALALQ LFWESELESL GDYLLIPVAR LALRGETAVP SRDFIPPCIT LAGSPALLDL LQEIREQLAS RCRWLEGYKK ERGIQAAEFG SKDLVFLLAL RTVSRHLARL SHWIEAVEVH PWQVYGLLGE LAAELTCFSE SIGAFGESVA DGGRLMPQYR HQELAWSFRL ARDLIVQLLN EVTAGPEYAL TLAFDGTWFA SDLKPAHFQG HSRFYLVLNT NEDPKLVLAS VATAAKLTAR ERLPLLISQA LPGIALEYIP DPPRELPHRS TSLFFSIDSR CDQWKLVQKW NNIALSWDQA PADLEVQVMI VARS
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