Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2794 |
Symbol | |
ID | 6782793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 3221697 |
End bp | 3222329 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642768788 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002139594 |
Protein GI | 197119167 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0916243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCTCGC CGCTCCCGCA CAGTGAGGAC TTGAAGGCGA TCGTCTTCGA CCTGGACGGG ACGCTCTACC GGGAGGACCG GCTGGGCGAT GAGGTGAACC AGAGCGCGAT CCGCTACGTA GCAGCGCTGC GGCAGGTGGA TATGATCGAC GCCGAGGCGA TGCTGCAGCG GGCTCGCGCC GAAAGCAGAG ACGGCGGTAC CTTGAGCCGC TCCGTGGTGG CGCTGGGGGG AAACCTCCCG GAAATGCACC GCAGGTTCGC CGCCGAAATC CATCCAGAAG AGTTCCTGAA AAGAGACGAG CGGGTGCCCA AGCTCCTGAA GCTCTTGGCC ACCCGCTTCC AGCTCTACCT CTATACCAAC AACAACCGTG ACCTCTCCGG GCGCATCATG GCCCGGTTGG GCGTCACCGG CCTTTTCCGG GAAATCTTCA CCATCGAGGA TTACTGGCTT CCCAAGCCGG ACTCCAAGCT CATCACTGAC ATACTTACCA AAATCGCTGT CAAACCTGCC GAGGCTCTTT TCGTCGGCGA CCGCTATGAG GTCGACCTGA TGGTTCCCGA GTCAATGGGG TGCCCCATAT TCGAATCCCA AACAGTCGAG GAATTGCTGA CGCTTGAACA ATTAGTTCAT TGA
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Protein sequence | MTSPLPHSED LKAIVFDLDG TLYREDRLGD EVNQSAIRYV AALRQVDMID AEAMLQRARA ESRDGGTLSR SVVALGGNLP EMHRRFAAEI HPEEFLKRDE RVPKLLKLLA TRFQLYLYTN NNRDLSGRIM ARLGVTGLFR EIFTIEDYWL PKPDSKLITD ILTKIAVKPA EALFVGDRYE VDLMVPESMG CPIFESQTVE ELLTLEQLVH
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