Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2644 |
Symbol | |
ID | 6782641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 3060436 |
End bp | 3062037 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642768639 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002139448 |
Protein GI | 197119021 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0361873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTTT CCCGCTGTCT CCCCCTCCTT CTAGCCCTCC TTGTCTTCGC CGGTTGCGCC AAGGGTGCGC CTGAGGACAA GGCGCGCGCG CAGGGCGGGG CGGCTTCCCG CGGCAGCTCC TTTGTTACCG GCAGCATCGG CGAGCCCTCG AACCTGATAC CGATACTGTC CGCCGACTCC GCCTCCAGCG ATGTGGCTGG CCTGGTCTAC AACGGGCTGG TGCGCTACGA CAAGAACCTG AAGCTGGAGG GGGACCTGGC CCAGTCGTGG GAGGTTTCCC CCGACGGCCT AGGCATCACC TTCCACCTGC GCCGCGGCGT CAAGTGGCAC GACGGCCACG ACTTCACCTC CCGCGACGTC CTCTACACCT ACAAGGTCAC CATCGACCCC AAGACGCCGA CCGCGTATGC GGAGGACTTC AAGCAGGTGC AGACCGCCGA GGCGGTGGAT ACTTACACCT TCAAGGTGCG TTACGCCAAG CCCTTCGCAC CGGCCTTGGC CTCGTGGGGG ATGCCGGTGC TGCCGGCTCA CCTTCTGGAG GGGAAGGACA TCACCAAGAG CCCGCTCTCC AGGAAGCCGG TCGGTACCGG ACCCTACATC TTCAAGGAAT GGGTGCCGGG ACAGAGGTTG ATCCTGGAGG CGAACCCGCA TTACTACGAG GGGGCGCCGC ACCTCTCGCC CTACGTCTAT CGCATCATCC CGGACAACTC CACCATGTAC ATGGAGCTCA AGGCTGGCGG CATCGACATG ATGGGGCTTT CCCCGGTGCA GTACCAGCGC CAGACCGGCA GCCGCGAGTT CCTGTCCCGT TTCAACAAGT ACCGCTATCC GGCCTCCGCT TACACCTACC TGGGGTACAA CCTGCGGCTT CCCATGTTCC AGGACGTCAG GGTGCGCCGC GCGCTCACCT GCGCCATCAA CAAAGAAGAG ATCATCCAGG GGGTCCTGCT CGGGATGGGG CAGATAGCGC ATGGTCCGTA CAAGCCGGGG ACCTGGGCCT GGAAACCGAA GATCGAAGCC GACCCCGGCT ACGATCCGGC TCGCGCCGCG GCACTCTTGA AGGAAGCAGG GTACGTCATG GGGAGTGACG GCATCCTGGT CAAGGACGGC AAGCCGTTGA GCTTCACCAT CATGACCAAC CAGGGGAACG ATCAGAGGCT CAAATGCGCC CAGATCATTC AGCGGCGCCT GAAGCGGGTC GGCATAGACG TCAAGATCCG CGTCATGGAA TGGGCCTCCT TCCTCACCAA CTTCATCGAC AAGGGTAGGT TCGAGGCGGT GCTGCTCGGT TGGACCATCT CCCAGGACCC CGACCTTTAC GACGTCTGGC ACTCGTCCAA GACCGGCCCC AAGGAGCTGA ACTTCATCGG CTACAAGAAC CCGGATTTGG ACCGGCTGAT CGTGGAGGGG CGCGGCACCT TCGATATGGG GAAACGGCGC GAGAGCTACT ACCGGATCCA GGAGATACTG GCACAGGACC AGCCTTACAC CTTCCTGTAC GTCCCGGACG CGCTCCCGGT AGTCGCCTCC AGGATCAAGG GGATTGAGCC TGCACCTGCG GGGATCAGCT ATAACTTGAT CAAATGGTAC GTGGAACAGT GA
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Protein sequence | MTFSRCLPLL LALLVFAGCA KGAPEDKARA QGGAASRGSS FVTGSIGEPS NLIPILSADS ASSDVAGLVY NGLVRYDKNL KLEGDLAQSW EVSPDGLGIT FHLRRGVKWH DGHDFTSRDV LYTYKVTIDP KTPTAYAEDF KQVQTAEAVD TYTFKVRYAK PFAPALASWG MPVLPAHLLE GKDITKSPLS RKPVGTGPYI FKEWVPGQRL ILEANPHYYE GAPHLSPYVY RIIPDNSTMY MELKAGGIDM MGLSPVQYQR QTGSREFLSR FNKYRYPASA YTYLGYNLRL PMFQDVRVRR ALTCAINKEE IIQGVLLGMG QIAHGPYKPG TWAWKPKIEA DPGYDPARAA ALLKEAGYVM GSDGILVKDG KPLSFTIMTN QGNDQRLKCA QIIQRRLKRV GIDVKIRVME WASFLTNFID KGRFEAVLLG WTISQDPDLY DVWHSSKTGP KELNFIGYKN PDLDRLIVEG RGTFDMGKRR ESYYRIQEIL AQDQPYTFLY VPDALPVVAS RIKGIEPAPA GISYNLIKWY VEQ
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