| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2389 |
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| Symbol | |
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| ID | 6782387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2767906 |
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| End bp | 2769753 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642768386 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_002139195 |
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| Protein GI | 197118768 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000607441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAAAAG CCATTGCCAT TGTTCAGTCC GCTTTTGCCA GAGCTAAGGT CCCTCTGATA
GTGCAGATGC TGTTTTTGAT CATTGCCGTC TCTCAGGCGA GGGGGGACGA AGAGCTTCGT
TCTTTGGAAC TCTACAATGG CGACGAGGCC GAGATAGTGT CGGGGAGCAG GTCCCCAAGG
CCGGCCTCCC AGACCGCCGA GAACATAACC GTGGTGACTT CCGAGGACAT ATTGGCGCTT
AACGCCCACA CCCTGGCGGA CATACTCTAT GCCGTAGCCG GGGTACAGGT GGAGATGATC
CGCACGCCGG GGGCCTCCAC CAACTTCAAG CTGCAGGGGG CCAACTTCAA CCACGTGCTG
GTATTGATAG ACAACGTCCC CCTCAATACG CTCTCGGAGA ATTACCCAGA CATCGCCGCA
GTCCCGGTGC AGATGATCGA GAGGGTGGAA ATAGTGAAGG GAGCCGCGTC GTCTGCATGG
GGCAACGCCT TGGGCGGGGT GATCAACGTC ATGACCAAGT CCCCGGATCA AGAGCGTGCC
ATCGGCGGCA TGGCGTCCGG GTCGTACGGC AAACGGGACA CCGCGGACCT GCGGGGGGAG
TTGAGCGGCA CGGTGGACAG TTTCGGCTAC TACCTGTCCG GCGGGAAGCT GCGGTCGGAC
GGCCTTCTTG CCAACAACGG GGTCGACAAG GACAACTTCT ACGGCAAGTT GCTGTACGAC
CTCCCAAACG GCGGCTCTCT CGCCTTGACC ACCTGGCTTA GCCAGGGCTT CAACGGCATG
TACCAGGACG GTCCCGTCTC CACCAGCCAG AACACGCGGT ATCTGATCAG CACCTTGGCC
GCCAGCTATC AGCTGACCGA CCACCTGCGT CTCGAAGCTG CGGCGGTAGC TTCGGAAACT
GAGGGAACCC TTTTTCGCCG GACGGACCTG CAGGGCGTTT CCAAGACATT AACCGTTGCC
CTGGACGAGT CCAGGGTAGG AGGGGGCTTC AAGCTCTCGT GGCTGGACGA GTTGCAGAGG
GTGGTGGCCG GGGTCGATTA CGAGCACGTG GCGGCGCAGG TGAGCAGCTC ACAGATCAGG
GCCGACATCC TGAACCGAGA CGCCGATCGG TTCGGCGTCT ACCTGAGCGA CACGCTGACG
CTCGGCCGCT TTGCCGTCAC CCCCAGTGCG CGCTTTGACA GGACGGGCTC AGGAGGCGAC
CACTTCAGCC CAAGCTTCGG CGTTACCTAC GCGCTCACCG ACAACAGCAT TCTTCGCGGC
TACACCGCCA CGGGATACAG CCTCACCTCG CTTAACCGCT CGGACTCCAC GGAAAAGGTC
TGGACCTCGC AGTTCGGCTT CGAGTCCGGC GACCTTCCCT ACCTCTGGGT CAAGGGAACC
CTGTTCAGAA ACGACACCTG GGATGTCATC GCGCCGACTG CGACCGGCAT TACTAAGGAG
CGGCAGCTGA AGCAGGGTGT AGAACTTGAG GCGAAGACCC TTCCTCTGTA CAACACCTCC
CTTTCGGTTG GGTACACCTT CATCGGCGCC ACCCTGGGCG TCAATGGCCC GGTCATCAAG
GGGGTGCCCA AGCACACCGT CAACATCGGG CTCAGATACC AGGACCCCAG CCACTTTCGC
GGAGAACTCA CCGGGCACTA CGTGGACTGG AACGAGGCTA GGCAAGGAGG TAGATACAGC
GACGTCATAT GGGACCTGCA CCTAAGAAAG GAAATGCATT ACGGGGAGAA GGTTTCCCTT
GAGCCGTTTG TTTCGGTTCG CAACCTGTTG AACGGACACC AGTATGTGTA CCGCGTATAC
CAGAATCCCG GGCGCTGGAT AGAGCTGGGG GTAAGATGCA ATTTCTGA
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| Protein sequence | MQKAIAIVQS AFARAKVPLI VQMLFLIIAV SQARGDEELR SLELYNGDEA EIVSGSRSPR
PASQTAENIT VVTSEDILAL NAHTLADILY AVAGVQVEMI RTPGASTNFK LQGANFNHVL
VLIDNVPLNT LSENYPDIAA VPVQMIERVE IVKGAASSAW GNALGGVINV MTKSPDQERA
IGGMASGSYG KRDTADLRGE LSGTVDSFGY YLSGGKLRSD GLLANNGVDK DNFYGKLLYD
LPNGGSLALT TWLSQGFNGM YQDGPVSTSQ NTRYLISTLA ASYQLTDHLR LEAAAVASET
EGTLFRRTDL QGVSKTLTVA LDESRVGGGF KLSWLDELQR VVAGVDYEHV AAQVSSSQIR
ADILNRDADR FGVYLSDTLT LGRFAVTPSA RFDRTGSGGD HFSPSFGVTY ALTDNSILRG
YTATGYSLTS LNRSDSTEKV WTSQFGFESG DLPYLWVKGT LFRNDTWDVI APTATGITKE
RQLKQGVELE AKTLPLYNTS LSVGYTFIGA TLGVNGPVIK GVPKHTVNIG LRYQDPSHFR
GELTGHYVDW NEARQGGRYS DVIWDLHLRK EMHYGEKVSL EPFVSVRNLL NGHQYVYRVY
QNPGRWIELG VRCNF
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