| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2376 |
|---|
| Symbol | |
|---|
| ID | 6782375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 2754099 |
|---|
| End bp | 2754659 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642768375 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_002139184 |
|---|
| Protein GI | 197118757 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0194718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGTTT TGCCGATAGC CGCATTCGTT CTTTGCACTT TCCCCGCCGT CGCCCTGGCC
GACCTCGCCC TGCCCGTGGA CGGGGTCGTG ACCTCAGGAG TTGGTTGGCG GGTCGATCCC
TTTGGCAGCG GCAAGCTCGC TTTTCATCGC GGCATCGACA TCGCAGTCCC CGTTGGCACC
CCGGTCCGGG CTACCCGCAA GGGAAGGGTC GTCTTCGCAG GAGAGCGTCG CGGTTACGGC
GCCACCGTCG TCGTCGAGCA CGGCAACGGT GACAGAACCC TCTATGGCCA CAATGTCTCA
GTCAAGGTGA GCGCCGGCGA GTTGGTGAAA GCAGGCGACG TATTGTCTTA TTCTGGAAAC
ACAGGTAGGT CCACGGGTCC TCATGTGCAC TACGAATTGC TCGCGAGCGG GCGTCCCTCA
GTAGAAGAAG TCGCAGCTTT CGAAGTTGCG GAAGAAACGC CGGCCCCGAC CGGCAGCCAG
CGTCGAGCGC TGGAACAAAA GATGGAAGAG TCCCTTGAGT TGCTCCTCAC GACTATTAGG
GGGAATCTAA CAGGCGGTTG A
|
|---|
| Protein sequence | MRVLPIAAFV LCTFPAVALA DLALPVDGVV TSGVGWRVDP FGSGKLAFHR GIDIAVPVGT
PVRATRKGRV VFAGERRGYG ATVVVEHGNG DRTLYGHNVS VKVSAGELVK AGDVLSYSGN
TGRSTGPHVH YELLASGRPS VEEVAAFEVA EETPAPTGSQ RRALEQKMEE SLELLLTTIR
GNLTGG
|
|---|
| |