| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2345 |
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| Symbol | |
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| ID | 6782344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 2720210 |
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| End bp | 2724982 |
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| Gene Length | 4773 bp |
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| Protein Length | 1590 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642768344 |
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| Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein |
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| Protein accession | YP_002139153 |
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| Protein GI | 197118726 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGC TGTTCGCCAC CTTAGTCACC TGCCTCATTT TCGGATGCCT GGCGGCGTCG
GCGTTTGCCG CACCCCAGAT CCTCGGCAGT TCCCTTTCCC CGGCAAGCGG TGCCACCAAT
GTTGACCCAG CTGTGGTCGA CACCATATGG GCTGAGTTCG ATGATGCCCG AATGGACAAG
GACAGCTTCT CCGGCAGGAT CAGCGTCGAC AACGGCGCCA AGTATTCGGT GAGCCTGGTT
AACGACTCAA AGGGGGACTG GGTCAAGATC AGCCTGAAGA ACAACCTCCA GTACAGTACC
ACCTACACGG TCAGCATCGA TTACAGGGTG CAGAACAAAA GCGGCACTAA GATGGGTTCC
AATTACAGCT GGAGTTTCAC CACCAAGGCG AAACCTTCCA CGGACACCAC TGCTCCTGTG
GTTACGGCAA CCTTCCCAGC CAGTTCCGCC ACCGACGTTC CTATTGCCTC CGACATCAGC
ATCACCTTCA GCGAGGTGAT GGACCCTCTC AGCATCACCA CCTTCAGCAT CAGCGTCAAT
AACGGCACTG TCAGCGGCAC GGTTTCCCTC GACGACACCC AAAAGATCGC CACCTTCCAT
CCCACCTCCA GCCTCAATCC CGACACACCC TACACCGTCA CCGTCAGCAG CACAGTCGGT
GATGCAGCGG GGAACAGGTT GCCTGGAGAT TACACCTTTA CCTTCCGCAC CCTCAAGGTA
GACAGCATCG CTCCGAGGGT GGTTTCCGTC ACCCCTGTCT CCGGCGCCAC CGGTGTCGCA
ACCGGCGCGT CCATAAGCGC CACCTTCAGC GAGGCCGTCA GCGCCGGCAC CATATCGTCC
AGCAGCTTCA GCGTAAGCGG TGTGAGCGGC ACGGTGAGCT ATAACCCCTC CACCTGGGTC
GCCACCTTCA CACCTTCCGC GCCGCTTGCA GCAGGTTCCA CCTATACGGT GACCATTTCC
ACTGCGGTGC AGGACCTCTC CGGCAACTCC CTCGCCGGCG CGAAGGTCTG GACCTTTACT
ACTGCCGGGG CGACCCCGCC ACCTTCTCTC AACGACTACT GCCAGGTTCC CCCCTACGTG
AGCAACGACG GAACAGGGGT CAAGCCGAAC CTGCTCCTCA TCGTCGACAA CTCGGGGAGC
ATGTACGAAT TCGCCTACAA GGCGCCCGGT ACCGGTACCA GCTCATACGA CACCAGTTAC
GATCCGGCCT TTCCCTACTT CGGCTACTTC GACAGCGCCA GGATGTATAA GTACAGCGGC
TCCTACTTCG AGCCCGATAC TGCCGCCGCC GTCAACAAGA GCTCCTTTTG GTCGGGCAAC
TTCCTGAACT GGCTCACCAT GCGCCGCGTC GACATCATTC GCAAGGTGCT CGTGGGAGGA
AAGGCGCTGT CGCGTTCCAC CAACACGACC AACTACCTCA TCGCGGCGGA GGACCCGGAC
CGCGACTTTT ACAAGAGCTA CAACAACGTT CGCTACACCG TCCGTGCCGG TACTTCGACC
GAGGTGATCA GGGACACCAC CAACAACAGA AGCTATGACG TCAAGGTCTA CGTCGGCCAG
AATCCGCCGC AGGACGGCCT GATCACGGGC TACCGGGACA AGATAAATTT CGGCCTCATG
TTCTTTAACG ACGGCTACCG CTACGAAAGC GGCGTTACCG CGGTGAAGGA CGGCGGTCAC
GTTGCTGTCG ATCTGGGGAC AACCGGCACC AACCTGGTCA CGCAGATAGA GAATACCGAT
CCCTCCACCT GGACCCCGCT CGCGGAAACG CTCTTCGAGG CCAGCCGCTA CTTCGAAGCT
GCCGACAGCG CCTACAACGG CGGGACCTAC TCGGGGAGGG ATCCGATCCA GTACCCCTGC
CAGAAGAACT TCGTGATGAT CCTGACGGAC GGGGAGTCGA CCCAGGACGA GAACCTTCCG
GGCGCCTCCA CCAACCTGGC CGGCAAGGTG ACAGACCCAA GCCTCGACGT GAAGAGTTGG
ATGGACAGCA TCGCCAGCCA GGAAAGGTAT CCCAGCCAGT ACGCGGCGAG CGCCAACACC
CAGTCGGGGA GCTACTACCT GGAAGCGGTA GCCTACTGGG CTCATAACAC CGATCTGCGC
TCCTCCACCC TGGGGAAGAA TGCCCTTCCC GGCAAGCAGA ACATCACGGT CTACACGGTC
TTCGCCTTCG ACGATTCCGC CATCGGCCGG GAAATACTTC AGAAGACGGC CAAGTACGGA
GGGTACGACG ACTACGACTC CACCGGCAGG CCGGACAAAA CCCGCAAGTG GGACAAAAAC
GGCGACGGCA TACCGGACAC CTACTTCGAG GCCCAGACCG GCTCCGTCCT CGCCGAATCC
TTGCAAAACG CCTTCAACGA CATCCTGGCC CGGGTCTCCT CCGGCACAGC CGCCTCCATC
CTCAGCAACA GCGAGGGGAG CGGCGCCAAC GTGCTGCAGG CCCTCTTTTA CCCGAAACGC
TTCTTCGGCG CCCAGACCTC TGTGGATTGG ATCGGGGAGC TGCATAACAT GTGGTACTAC
GTCGATCCCT TCATCAGCAA CAGCACCATG CGGGAGGACA GCGACTACGT CGAGGCGACG
CCCTCGCCGG CGCACTACCT GAACCTCGGC CGGGATAACG TGGTCGGGTT TCGCTACAAC
GCCTCGCTCG ACCGGACCAC GGCGCGGCGC TTCAGCGATG CCCAGGGGGA CGGCAGGCCC
GACGTCGACA GCAACGGGGA CGGTGTCGCC GACAGCTACA CCTTCCTCGA TGAGGTGGAT
GCCGACTCGG TGAAGAGCAT CTGGCGCGCC GGAAAACTTC TCTGGGAGAG GAGCGCGCCG
CGCACCATCT ACACCCAGAC TGTCGGCACC CTCACCAGCT TCACCGGCCT GGACACCTCG
CTCGCCTCCA CCCGCAGCCT GCTCCAGGCG GCCAATCAGA CTGAGGCGGA CAAAATCATC
TCCTATATTG CGGGGACCGA CCAGGGGGGG TACCGAAACC GCACCGTGAA CATAGGCGGA
ACCCCAGGGG TCTGGCGCTT GGGGGACATC GTTGCCTCGA CGCCAAAGCT GCAGTCCACG
ATGAAGCTAA ATGCCTATAA CACCCCTGTC CCTGGAGGAT ACGGCGACAC CTCCTACGGC
GATGACCGGC ACAAAACAGG CTTCATCTAC AGTTCCGCCT ATGCCAATCG TGGCATGGTG
TACGTCGGGG CCAACGACGG AATGTTGCAC GCCTTCAAGC TTGGGAAACT CGATGTCAGC
AGTTCCGGGG ACCGTCGGGC CTCTCTCTCC GGCACCGGTT TGGGGGAGGA GCAGTGGGCC
TTCATCCCCA AAAACGCGCT TCCCTATCTA ACCTACTACG CGGACCCGGC ATACAAACAC
CTTTACTACG TGGACGGGTC AACCATCATC AACGACGTGA GCATGGGTAA GCCTGCCGGC
TGCAGCAGCG ACTACTGGAA CTGTGCCAAG GCCACGGACG GAAGCAACTG GCGCACCGTC
TTGGTGGGGA GCATGGGGCT TGGCGGGGCA TCCAAGATGA AAGGTGCGGG GTGCAAGGGT
ACCGACTGCG TCGAGACCCC GGCCCTCGAC CCGCTCGATG TCACCAAAGG TGTCGGGTAC
TCCTCCTACT TCGCCCTCGA CGTCACGCAG CCCGAGTCGC CGTCGCTTAT GTGGGAGTTC
GGGCACCAGA ACCTCGGCTT CTCCACCGCA GGGGCGGCAC TCGTGAAGAT CAGCGCCCGC
AAGGCGGACA ACGTCACCCC CGACAAGTCC AAGAACGGGA AGTGGTTCGC CGTGCTCGCC
TCGGGCCCTA CCGGTCCCAT TGACACCTCC AGCCACCAGT TCAAGGGGAC CTCGACCCAA
AACCTCACCA TCTACGTGCT GAACCTTGAG GACGGCACGG TTGCCGCGGT GCTCGACACC
CTGGTCGATG GCAGCAAGAT AGCAAACGCC TTCGCCGGCA CCATCACGAG CGGCGTCTCC
GACACGGACC GGTGGAACAC CGCCTCGCCT GGGCACTACC AGGACGACGC CATTTACATC
GGCTACACGC AGCTCTTAGG CACCACCTGG ACCGGGGGCG GGGTGCTGCG GGTTGTTACC
GGCGAGGACC CGAATCCCCG GAACTGGAAG CTCAGCAAGG TGATCGACGG GACCGGGCCT
GTTACCACCA GCGTGATCCG GCTCCAGGAC CGCAAGAACC ACAACCTCTG GCTCTACTTC
GGCTCCGGGC GCTACTACTA CAACCAGGAC GACAACGACG GACAGCGCCG GCTCTACGGC
GTGAAGGATC CGTGCTACAC CTCAGCGGAC CGCCTCGATG CCTCCTGCAG TTCAGGAACT
TCACTGTCGC AGCTGACCAA CCAGTCAAGC ACCATATCGA ACAGCATCAG CAACCAGGGG
TGGTACATAA ATCTCGCCGG TGAGCAGACT GCCGCCTCGC TCGGCGCCGA GCGTGTCGTC
ACCGATCCTG TGGCGCTTAC CAACGGGGTG GTCTACTACA CCACCTACGC ACCCACCTCC
GACCCCTGCG GGTTCGGGGG GACCACGGCG CTATGGGCGG CGAAGTTCGA TACCGGGGGG
AATCCCCCGG CCGCGGCACT GCAGGGCAAG GTGCTGGTTC AGCTCTCCAC CGGGAGCTTC
GAGGAGCTAG ACCTGGAAAA ACGGCCGCCG CACACGGACC CGCGCGAGGT GTTCGATTCC
CTGGTCGGGA AAGCGTCGGC GGATTCACCC CCCATCTTCA CCAAAAGCAA CCTGAAGCCG
GTGAAGCGGA TCATGCACAT CAAGGAACAC TAG
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| Protein sequence | MKTLFATLVT CLIFGCLAAS AFAAPQILGS SLSPASGATN VDPAVVDTIW AEFDDARMDK
DSFSGRISVD NGAKYSVSLV NDSKGDWVKI SLKNNLQYST TYTVSIDYRV QNKSGTKMGS
NYSWSFTTKA KPSTDTTAPV VTATFPASSA TDVPIASDIS ITFSEVMDPL SITTFSISVN
NGTVSGTVSL DDTQKIATFH PTSSLNPDTP YTVTVSSTVG DAAGNRLPGD YTFTFRTLKV
DSIAPRVVSV TPVSGATGVA TGASISATFS EAVSAGTISS SSFSVSGVSG TVSYNPSTWV
ATFTPSAPLA AGSTYTVTIS TAVQDLSGNS LAGAKVWTFT TAGATPPPSL NDYCQVPPYV
SNDGTGVKPN LLLIVDNSGS MYEFAYKAPG TGTSSYDTSY DPAFPYFGYF DSARMYKYSG
SYFEPDTAAA VNKSSFWSGN FLNWLTMRRV DIIRKVLVGG KALSRSTNTT NYLIAAEDPD
RDFYKSYNNV RYTVRAGTST EVIRDTTNNR SYDVKVYVGQ NPPQDGLITG YRDKINFGLM
FFNDGYRYES GVTAVKDGGH VAVDLGTTGT NLVTQIENTD PSTWTPLAET LFEASRYFEA
ADSAYNGGTY SGRDPIQYPC QKNFVMILTD GESTQDENLP GASTNLAGKV TDPSLDVKSW
MDSIASQERY PSQYAASANT QSGSYYLEAV AYWAHNTDLR SSTLGKNALP GKQNITVYTV
FAFDDSAIGR EILQKTAKYG GYDDYDSTGR PDKTRKWDKN GDGIPDTYFE AQTGSVLAES
LQNAFNDILA RVSSGTAASI LSNSEGSGAN VLQALFYPKR FFGAQTSVDW IGELHNMWYY
VDPFISNSTM REDSDYVEAT PSPAHYLNLG RDNVVGFRYN ASLDRTTARR FSDAQGDGRP
DVDSNGDGVA DSYTFLDEVD ADSVKSIWRA GKLLWERSAP RTIYTQTVGT LTSFTGLDTS
LASTRSLLQA ANQTEADKII SYIAGTDQGG YRNRTVNIGG TPGVWRLGDI VASTPKLQST
MKLNAYNTPV PGGYGDTSYG DDRHKTGFIY SSAYANRGMV YVGANDGMLH AFKLGKLDVS
SSGDRRASLS GTGLGEEQWA FIPKNALPYL TYYADPAYKH LYYVDGSTII NDVSMGKPAG
CSSDYWNCAK ATDGSNWRTV LVGSMGLGGA SKMKGAGCKG TDCVETPALD PLDVTKGVGY
SSYFALDVTQ PESPSLMWEF GHQNLGFSTA GAALVKISAR KADNVTPDKS KNGKWFAVLA
SGPTGPIDTS SHQFKGTSTQ NLTIYVLNLE DGTVAAVLDT LVDGSKIANA FAGTITSGVS
DTDRWNTASP GHYQDDAIYI GYTQLLGTTW TGGGVLRVVT GEDPNPRNWK LSKVIDGTGP
VTTSVIRLQD RKNHNLWLYF GSGRYYYNQD DNDGQRRLYG VKDPCYTSAD RLDASCSSGT
SLSQLTNQSS TISNSISNQG WYINLAGEQT AASLGAERVV TDPVALTNGV VYYTTYAPTS
DPCGFGGTTA LWAAKFDTGG NPPAAALQGK VLVQLSTGSF EELDLEKRPP HTDPREVFDS
LVGKASADSP PIFTKSNLKP VKRIMHIKEH
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