| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2061 |
|---|
| Symbol | |
|---|
| ID | 6782055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | + |
|---|
| Start bp | 2373803 |
|---|
| End bp | 2375476 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642768056 |
|---|
| Product | Na+/Picotransporter |
|---|
| Protein accession | YP_002138870 |
|---|
| Protein GI | 197118443 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1283] Na+/phosphate symporter |
|---|
| TIGRFAM ID | [TIGR00704] Na/Pi-cotransporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.803525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCCCA CTTATTGGTC CTACATCATC GAGGGGCTGG GCGGGCTGGC GCTTTTCATC
CTCGGCATGC GCACCATGTC GGAGGGGCTG CAAAAGGTGA GCGGGGAACG TCTCCGCAGG
CTTTTGGAGA AGGCAACCGG CAACCGGCTC ACCGCGCCTT TGGTCGGAAG CTGCCTCGCC
TCGTTGTTGC AGTCCGGCAG TGCCGCATCG GTACTGGTGG TCGGCTTCGT CAACGCCGGG
CTCCTCTCGC TGTACCAGGC CCTCGGTGTG CTTCTGGGCA CCGGCATCGG CACAACCCTC
GCCATTCAAA TCATCGCCTT CCGGGTCACG GCGCTGGCGC TTCCCGCCAT CACCGTCGGG
GTCCTTTTGA GCTTCTTCTC CAAAAGCAGG CGCTTGTCGC AACTGGGCGG GTTGCTTTTG
GGGGTGGGGC TCGTCTTTTT CGGCCTCTCC ATCATCGAGG GGGCATCGCT TCCCTTGAGC
GAAAGCGCCA TCATCTCCGG GATGCGCGAG GGGCTTCCCT CGATCCGGCT GGCTGCGGTG
CTCCTGGGGG CGCTCTTGAC CTTCCTGGTG CAGTCGGGAA GCGCGACCTT GGGAATCGTC
ATCGCGCTTG CCTCCGCGGG AGTCCTCTCC TATGACGCCG CCATCGCCAT GGTCATCGGC
GAGGTGGCTG GAGCGGCGCT GATCCCGCTC ATCGCCTCCG TCGGGGGGAG CCAAACCGCC
AAAAGGGCGG TCGTCATCTA CCTCGGTATC AGCTGGGGCG CCATCGCGCT CGGGCTCCTC
TTCTTCCCGC TTTTCCTGCG CGCGATCAAT GCCGTCTCCC CAGGCGATCT GTCGCTTTTG
CAGCAACCCG GCGCCGCCCC GCATGCGGTG GCCCAGGCGC TGCGGCCGTA CGTCGCCAGG
CACCTGGCCA ACGCCCACAC CATATTTACC GTCGCGTCGC TCTTGATCTT TCTTCCCCTG
CTCGGCTTTT TCACCCGTTC CGCCGAAACG CTTCTCCCCG CCCGGCGCTC CGAGAGCGAG
CCGCGCCCGA GGTTCATCGA CACGCGGGTG ATCAAGACGC CTACCATCGC GCTGGTGCAG
GCCTGGAGCG AACTCTCCCG CATGGGGGGG CTTTCAGCCG CCATGTATCG CGAACTGGTG
TCGCAGTTCG ACTCCTACAA CCCGAAGGTC GTCGCCGCGA TCAGGGACAA GGAACTGGTG
CTCGACGTGC TGCACCGCGA CATGTCCCAT TTCCTGGTGG CGCTTTCCAG GGAGACGCTC
TCGCTGGAGC GGGCAGTGGA GATACCTGCC ATGCTGCAGA TGGTGAACGA GATTGAGCAG
GTGGGGGACC AGACCGAGGC GGTGCTGAAC TACCTGGTGC GCAAGAAAGA GGAACGGCTC
CGCTTTTCCA GCTCGGCCAT GGAGGAGTTG AAGCGCTTCG CCACCAAGGT GGGGGAAGTC
GTTTCCCTTT GCGAGCGAGT CCTTAAAGGG GAGGAGGACG AGGACCCGGC CCCCCTGCGC
GCTGAGGTGG CCCTGCTTCA AGAGGAGCTG CAGGCGAGCC ATCTGCGCCG GCTTAAAGTC
GGCAAGTGCA GCATCGTGGC GGGGCTTCTC TACGGCGACA TGATCATCGC CTTCTGCAAG
ATCTCCGAAC TATGCTTCTC CATCATCTCC CAGAAAAAAG GAATCGCCGC ATGA
|
|---|
| Protein sequence | MVPTYWSYII EGLGGLALFI LGMRTMSEGL QKVSGERLRR LLEKATGNRL TAPLVGSCLA
SLLQSGSAAS VLVVGFVNAG LLSLYQALGV LLGTGIGTTL AIQIIAFRVT ALALPAITVG
VLLSFFSKSR RLSQLGGLLL GVGLVFFGLS IIEGASLPLS ESAIISGMRE GLPSIRLAAV
LLGALLTFLV QSGSATLGIV IALASAGVLS YDAAIAMVIG EVAGAALIPL IASVGGSQTA
KRAVVIYLGI SWGAIALGLL FFPLFLRAIN AVSPGDLSLL QQPGAAPHAV AQALRPYVAR
HLANAHTIFT VASLLIFLPL LGFFTRSAET LLPARRSESE PRPRFIDTRV IKTPTIALVQ
AWSELSRMGG LSAAMYRELV SQFDSYNPKV VAAIRDKELV LDVLHRDMSH FLVALSRETL
SLERAVEIPA MLQMVNEIEQ VGDQTEAVLN YLVRKKEERL RFSSSAMEEL KRFATKVGEV
VSLCERVLKG EEDEDPAPLR AEVALLQEEL QASHLRRLKV GKCSIVAGLL YGDMIIAFCK
ISELCFSIIS QKKGIAA
|
|---|
| |