Gene Gbem_2028 details

Gene Information

• Locus tag: Gbem_2028
• ID: 6782022
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: -
• Start bp: 2336715
• End bp: 2338595
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642768023
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_002138837
• Protein GI: 197118410
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCAA CCAACGGGGG TTCCATGCTG AACAATCTGA AAATCCGCTC CAGGCTCATC 
GCCGGCTTTG GCGCGCTCGT CTTCTTCCTG GTGCTGATCG GGGCGCTCTC CCTGAAGAAC 
CTGAAGGCTC AGGGAGATCT GATGACCGAG TTCCACGAAC ACCCCTTCAC CGTCACCAAC 
GCCATACGCT CGGTCGACGC CAACGTGGTG AGGATGCACA GGTCCATGAA GGACGTGGTG 
CTCTACGCCC GGGACGCCGA GGATCTGGAA GCGTCGCTCG CTGATATCGA AGCCAGCGAA 
AGGATCGTCT ACCGCGACCT CGCCCTGGTC AGGGAGCGCT TCCTCGGCGA CAAGGGGAAG 
ATCGACCAGA TCAAGGAGTC GATGGACAAG TGGAAACAGG TGCGCGCGCA TACCATTGAA 
CTGGTACGCC AGGGGAAGAT CGCCGAGTCG GTCGCCTTCC ACAAGAACTA CGCGAGGCGC 
ATGGTCGCGG GGATCGACGC CCAGGTGAAC GAGGTGCTTA AGTTCGCCAC CAGCAAGGCA 
GATAGCTTCG TTGAGGAATC GCAGAAAAAC CAGCGCACCA TCTTCGCCGT CACCGCGATC 
CTGGTGCTTT TGGCCGGAGC TCTTGCCGTC TGGACCGCGT TCGCCATCAC ATCCTCCATC 
ACCGCTCCGC TGGACCAGGC GGTGCAGGCC GCGGAAAGAC TCTCCCAGGG GGACGTGTCG 
GTGGAGATCC ACAGCGACGC CGGCGACGAA CTCGGGCAGC TGCTGCGCGC CATGGAGAAG 
ATGGTGCTGT CGCTGCGCCG GATGGGAGAG ACAGCGAACC AGATCGCTCT GGGAGACCTG 
GACACCGAGG TTATCCCGGC CTCGGAGCGG GACGTCTTCG GCCTGGCCAT GTCGAACATG 
GTGGCGTCGC TGAAAAGGCT TGCCGCCAGC GCCGACCGCA TCGCCTCGGG GGACCTCACC 
ATCGACGTAG TCCCCGCCTC CCCCAAGGAC CGGCTCGGCA ACTCCTTCAG CCAGATGACC 
CGGAACCTTC GGGAGTTGAG CCTGGAGATC CGAGCGGTGG TGAACGTCCT GGCCGGGTCG 
GCCGCCGAGA TCATGACCAC GGTGAGCCAG CTCGCCTCCA GTTCCGCCCA GACCGCGACC 
TCCATCTCCG AGACCAACGC CACGGTGCAG GAGATCCGCC AGACCACCGA CCTCACCTCG 
CAAAAGTCGA GGCAGGTCTA CGAGAGCGCC AACCGCGCGG TGCAGGTCGC CAAGGAGGGG 
CGCGAGTCGG TATCCAGCGC CATCGACGGC ATGCAGGGGA TCGACGAGCG CATGGGCTTC 
ATCGCTGAGC GCATCGTCAA TTTGAGCGAG CAGAGCCAGG CCATCGGCGA GATCATCGCC 
ACCGTGGCCG ACCTCGCCGA ACAATCGAAC CTCCTTGCGG TGAACGCCGC CATCGAGGCG 
GCCAAAGCCG GCGAGCACGG CAAGGGATTC GCCGTCGTGG CCCAGGAGGT GAAGAACCTG 
GCCACCCAGT CGAAACAGGC GACCTCGCAG GTCAGGAGCA TCATCGGACA GATCCAGAAG 
GCGACCACCG CTGCGGTCCT CGCCACCGAA CAGGGGAGCA AGGCCGTCGA GGCAGGCGTG 
AAGCAGTCCG GCGAAGCGGG CGAGTCGATC CGCGTGCTCG CCTCCAGCAT CGAGGAATCC 
TCCAACGCCA CGCTGCAGAT CGTCACCTCC ACCCAGGAGC AGGCGATCGG CATGGACCAG 
ATCGCCATCG CCATCCACAG CATCAATCAG GCGAGCGACC AGAACGTCGA GGGTTCGCGC 
CAGATCGAGG CGGCGGCCCG TAACCTCTAC GAACTGAACC AGAAGCTCCA AGAGCTGGTA 
AGCGGGTATA AGGTGGCATA A 

 

Protein sequence

MKATNGGSML NNLKIRSRLI AGFGALVFFL VLIGALSLKN LKAQGDLMTE FHEHPFTVTN 
AIRSVDANVV RMHRSMKDVV LYARDAEDLE ASLADIEASE RIVYRDLALV RERFLGDKGK 
IDQIKESMDK WKQVRAHTIE LVRQGKIAES VAFHKNYARR MVAGIDAQVN EVLKFATSKA 
DSFVEESQKN QRTIFAVTAI LVLLAGALAV WTAFAITSSI TAPLDQAVQA AERLSQGDVS 
VEIHSDAGDE LGQLLRAMEK MVLSLRRMGE TANQIALGDL DTEVIPASER DVFGLAMSNM 
VASLKRLAAS ADRIASGDLT IDVVPASPKD RLGNSFSQMT RNLRELSLEI RAVVNVLAGS 
AAEIMTTVSQ LASSSAQTAT SISETNATVQ EIRQTTDLTS QKSRQVYESA NRAVQVAKEG 
RESVSSAIDG MQGIDERMGF IAERIVNLSE QSQAIGEIIA TVADLAEQSN LLAVNAAIEA 
AKAGEHGKGF AVVAQEVKNL ATQSKQATSQ VRSIIGQIQK ATTAAVLATE QGSKAVEAGV 
KQSGEAGESI RVLASSIEES SNATLQIVTS TQEQAIGMDQ IAIAIHSINQ ASDQNVEGSR 
QIEAAARNLY ELNQKLQELV SGYKVA