Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_2020 |
Symbol | |
ID | 6782014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2324679 |
End bp | 2326325 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642768015 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_002138829 |
Protein GI | 197118402 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00014741 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATT TGCTGATCCC CCGTACCGCG TCCGCCTACA ATTACCCTTT GCTGATAAAG AACCTGTTGC TCTACCCGGT GGTCGACAAC CCCGACCAGG AGATCGTATA CCGTGACCTG TACCGGGGCA ATTACCGCCA ACTGAGGGAG CGGGTGAAGC GGCTGGCCAA CATGCTCACC GGGCTCGGCG TGAAGCCGGG GCAAACGGTG GCCGTGATGG ACTGGGACAG CCATCGCTAC CTGGAACTTT TCTTCGCGGT GCCGATGATC GGCGCGGTGC TCCACACCAT AAACGTGCGC CTGTCCGCGG AGCAGATCCT TTACACCATC GACCATGCCG AGGACGACGT GCTGCTGGTC AACAGCGAGT TTCTCCCCAT CATGGAGCAG ATCCGCGGCA GGATCGACAA CGTCCGCACC TATATCCTCA TCTCCGATGA CGGCATGACG GAATGCAGCA CCATCCCCGC CTGCGGCGAG TACGAACAGC TCCTGGCCCA GGCTTCGCCG GAGTTCGAGT TCCCCGACCT GGACGAGAAC ACCAGGGCCA CGACTTTCTA CACCACCGGA ACCACGGGGA TGCCGAAGGG GGTCTATTTC AGCCACCGGC AACTGGTGCT TCATTCGCTG GGACTTTTGG CGACGCTCGG TTCCTCCACC TCGCACGCCT GTCTGCACCG CGACGACGTC TACATGCCGA TTACCCCGAT GTTCCACGTT CATGCCTGGG GGGTCCCCTA TATCGCCACC ATGCTGGGGG TGAAGCAGGT CTATCCCGGG CGCTACCTGC CGGAAACCCT GCTGGAGCTC AAGGAGAAGG AAGGGGTCAG TTTCTCCCAT TGCGTTCCGA CCATCCTGCA CATGCTCTTG AAGCACCCCC TTGCGGAAAA GATCGACCTG CGGGGGTGGA AACTCATCAT CGGCGGCGCG GCTTTGTCGC GCAACCTCTG CGTCGAGTCG CTGAGGCTTG GCATCGACGT CTTCACCGGG TACGGGATGT CCGAGACCTG CCCGATCCTC ACCATTTCCA AGCTCACACC GGAGATGCTG GAACTATCCC ACGCCGAGCA GGCGGAAATC CGCTGCAAAA CGGGTCTTGC CCTGGCCTTA GTCGATCTGC GCGTGGTCGA CAGCAACTTC AACGAGCTCC CCCGCGACGG CGTCAGCGCC GGCAACGTGG TGGTGCGCTC CCCCTGGCTT TCGCAGGGAT ACCTGAAGGA TCACAAGGCC TCCGAGCGTC TCTGGGAGGG GGGGTATCTC CATACCGGCG ACGTGGCGGT GCGGGACGAG CTGGGCTATC TCAAGATCAC CGACCGGAGC AAGGACGTGA TCAAGGTCGC CGGCGAATGG GTTTCCTCGC TGGAGCTGGA GGACATTGTC GCGCATCACC CGGCAGTAGC CGAGGTGGCG GTGATAGGGA AGCCTGACGA GAAGTGGGGC GAGCGCCCCC TGGCGCTGGT CGTTCTCAAG CCGACCGAGG GGACGAAGGT GACCGATAAG GAGATCGCCC ACCACGTGAG GGAGTACGCC GACAAGGGTG TGGTGAGCAA GCAGGTCGTC CTGGTCAAGG TGAAGCTCGT TCCATCCATC GACAAGACTA GCGTTGGAAA GATCAACAAG GTGGCACTGC GGGAGAAATA TCTCTGA
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Protein sequence | MSDLLIPRTA SAYNYPLLIK NLLLYPVVDN PDQEIVYRDL YRGNYRQLRE RVKRLANMLT GLGVKPGQTV AVMDWDSHRY LELFFAVPMI GAVLHTINVR LSAEQILYTI DHAEDDVLLV NSEFLPIMEQ IRGRIDNVRT YILISDDGMT ECSTIPACGE YEQLLAQASP EFEFPDLDEN TRATTFYTTG TTGMPKGVYF SHRQLVLHSL GLLATLGSST SHACLHRDDV YMPITPMFHV HAWGVPYIAT MLGVKQVYPG RYLPETLLEL KEKEGVSFSH CVPTILHMLL KHPLAEKIDL RGWKLIIGGA ALSRNLCVES LRLGIDVFTG YGMSETCPIL TISKLTPEML ELSHAEQAEI RCKTGLALAL VDLRVVDSNF NELPRDGVSA GNVVVRSPWL SQGYLKDHKA SERLWEGGYL HTGDVAVRDE LGYLKITDRS KDVIKVAGEW VSSLELEDIV AHHPAVAEVA VIGKPDEKWG ERPLALVVLK PTEGTKVTDK EIAHHVREYA DKGVVSKQVV LVKVKLVPSI DKTSVGKINK VALREKYL
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