Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1940 |
Symbol | |
ID | 6781930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 2241568 |
End bp | 2242854 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642767932 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002138750 |
Protein GI | 197118323 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCAAGA AAGCAAAGAT CGTTGGATTA ATTTTGGCCC TCGCCCTGAC GGGAGCCTTT ACCTATCGTT TCGTCCAGAT GGGCGCCGCC GGTTCGGAAC CAGGCGAGCA TGCCGGCGAG GCCGGGCATA CCGAAGCAAA GCATGAGGAA GAGGGGCACG CCAAGGAGGA AAAGGGGCAC GAGGAAGAGC ATGCCGGAGT AGCGGGGCAT GACGAACACG GAGCTGCCGG CAGCGTGACC ATGAAACCCG AGATCCAGAA GCAAAACGGC GTGGTGCTGG CGGCCGCGAA GCCGCTGCGG CTGGCGGGAG TGATACGGGC GACCGGCAAG GTCGAGGTGA ACGCGGACCG GATCGCTCAC GTGGCGCCCC GCATCCCGGG GAAGGTGGTT TCGGTGCGGG CTTCCCTCGG CGACAGCGTG TCGGCGGGGC AGTCCCTGGC GACCCTCGAC AGCGTCGAGG TCGGGGAAGC GATCGGCCGC TACCGCCAGG CGAAGACCAG GCTCGCCCTG GCGCAGGGAA ACATGGACCG GGTCAAGGCG CTTGTGGATA GGAAGATCGC GGCGAGAAAG GACATACTCC AGGCCGAGAC CGACTATAAG ACGGCGCAGA CCGAGCTCGC CACCGACGAG GAGCGCCTCT CCCTGTACGG GGTATCCGTC GCAGAGGTAA GGGGAGGCGC CCGGAAGCCG CTATTGCCGG TCCGCTCCCC AATCGGCGGG ATCGTCACCG AGAAACACGC CATCGTCGGC GAGCTTGCCG ACCCATCCAA GAGCCTCTAC ACGGTCGCGG ACCTCTCCTC GGTCTGGGTG CTGGTGGATA TAAACGAAAA GGACCTGGCG AAGGTCCACA AAGGGCAGGG GGCTGTGGTC ACCGTCGGGG CCTTCCCCGA CCTGAAGCTC AAGGGGCGCA TCACCTACAT CGCCGACCTC GTGGACGAGT CGACCCGCAC GGTGAAGGCG CGGGTAGAAG TGACGAACCC CGGCCGGAAG CTGAAACCCG AGATGTTCGC CACGGCGGAA CTTGCCCTGG CGGCAGACGC CCCCCCGGTA CTCGCGGTCC CGGAAGACGC TGTCCAGGAT CTGGACGGCA AGAAGGTGGT CTTCGTCGCC GAAGAGGGGA ACCGGTTCGA GGCGCGCCTG GTGCAGTTGG GAAGGAGCGC CGCGGGGCTC GTGGAGATCG CCTCCGGCCT GAAAGAGGGG GAGAACTACG CCGCCAAGGG GGCCTTCATC CTCAAGTCGG AAGTGAAAAA AGGGGAAGTG GTCGACGAAC ACGGCCACGG GAAATGA
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Protein sequence | MSKKAKIVGL ILALALTGAF TYRFVQMGAA GSEPGEHAGE AGHTEAKHEE EGHAKEEKGH EEEHAGVAGH DEHGAAGSVT MKPEIQKQNG VVLAAAKPLR LAGVIRATGK VEVNADRIAH VAPRIPGKVV SVRASLGDSV SAGQSLATLD SVEVGEAIGR YRQAKTRLAL AQGNMDRVKA LVDRKIAARK DILQAETDYK TAQTELATDE ERLSLYGVSV AEVRGGARKP LLPVRSPIGG IVTEKHAIVG ELADPSKSLY TVADLSSVWV LVDINEKDLA KVHKGQGAVV TVGAFPDLKL KGRITYIADL VDESTRTVKA RVEVTNPGRK LKPEMFATAE LALAADAPPV LAVPEDAVQD LDGKKVVFVA EEGNRFEARL VQLGRSAAGL VEIASGLKEG ENYAAKGAFI LKSEVKKGEV VDEHGHGK
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