| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1939 |
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| Symbol | |
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| ID | 6781929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 2240273 |
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| End bp | 2241571 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642767931 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002138749 |
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| Protein GI | 197118322 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTGATG TGCCGCTGAT GAATAGATAC GGCCTGCTGG CCGCTGCAAT GTCCGTGCTG
CTCTGCGCTA CTGCGGGACC GGCCCGGGGC GAGGAGATTT CGCTGCAAAA GGCAGTGGAG
ATCGCTGTCC AAAATAACGT GGAGCTGAAC GCTTTCCGCA AAGAAGAGGG GCTTCGCGAA
GCTGCGAAGA CGAAGGCGGG CCTGCTCCCC AACCCGACGC TGGAGCTCAG CCTCGAATCC
GGCGCCCTGA CCGGCAACAG CGGGGAGAAT GCCTTTTCCG TCGGCGTATC GCAGGAGTTT
CTCCTCGCCG GAAAAAGGGA GAAGAGGCTT GCCCTGGCGC AAAAGGAACT GGAGGTATAC
CGCTGGCAAC TGGCCGACCG GGAAAGGCTG CTCCGCCTCG ACGCGAAGGC GCGGTTTTAT
CAGGTGCTGC TGGCCGTCAG GAAGCTAAAG CTGGCCGAGG GAGGAATCGA ACTGAACCGC
CACCTTTACC AGGTGGCCAA GGAGCGTCTC GCCGCCGGCG ACATCCCCGA ACTGGAACTG
AACCTGGTGC AGGTGGAGCT GGCCAGGAGC GAGGGGGCGA AAACCGCCGC TCTTGAGGCC
GTTTTGTCCA GCCGTGCCGA GCTTTCCCTC CTCTTGGGGG GGAGCGAGGT CGACCCGGCG
CTCCCGACCG GGCCCCTGGA AGCTGGGGGG GCGGTAAAGG AGGCACAGGG TGATCTTTTC
CGACTCGCCT TGGAACGGCG CCCGGATCTC AAGGCGCTTA GGGCAGAGGC GGAGAAGGGG
AGCGCGGAGC TTTCCCTGGC CCAGGCCGAG GGGGTCCCGA ACCTCACCGC CGGCCTTGGG
CTCAAGCGCG ACACCACCAC CGTCGAGGTG GCGGGGCTGG AAGGGAAAGA CACCTCTTAT
ACCGTCGGGA TCACTCTCTC GATGCCGATA CCGCTTTTCG ACAAGAACCA GTCGGGCGTC
CGCGAGGCAA GCGTCAGACG CGACACCGCC GGCAGCCGGC TAGCCGTTGC AGTCAAACGG
GTAGAGCGCG AGGTGGCCAC GGCGTATGCC AGCCTCTCCA ACGCCGAGCA GCTCCTTTCC
CTGTACCTCA GAAACGTCAT GCCCCAGCTC GAGGAGAACC TGAAGCTGAC CAGCGAGGCT
TACCAACTGG GTGAAGTCCC TGTGCTGACG GTCTTCGAGG AGCAGAAGAA GTACCTCGAG
GTGAACCAGG GGTACCTGGA AGCCCTGAAC CAGCGGCAGC AGGCGCTTTT CAAACTGGAA
GCGGCGGCGG CAACCGAACT TACCGGAGGT GTGCATTGA
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| Protein sequence | MFDVPLMNRY GLLAAAMSVL LCATAGPARG EEISLQKAVE IAVQNNVELN AFRKEEGLRE
AAKTKAGLLP NPTLELSLES GALTGNSGEN AFSVGVSQEF LLAGKREKRL ALAQKELEVY
RWQLADRERL LRLDAKARFY QVLLAVRKLK LAEGGIELNR HLYQVAKERL AAGDIPELEL
NLVQVELARS EGAKTAALEA VLSSRAELSL LLGGSEVDPA LPTGPLEAGG AVKEAQGDLF
RLALERRPDL KALRAEAEKG SAELSLAQAE GVPNLTAGLG LKRDTTTVEV AGLEGKDTSY
TVGITLSMPI PLFDKNQSGV REASVRRDTA GSRLAVAVKR VEREVATAYA SLSNAEQLLS
LYLRNVMPQL EENLKLTSEA YQLGEVPVLT VFEEQKKYLE VNQGYLEALN QRQQALFKLE
AAAATELTGG VH
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