Gene Gbem_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1897 
Symbol 
ID6781887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp2196360 
End bp2197634 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content64% 
IMG OID642767889 
Productdihydroorotase, multifunctional complex type 
Protein accessionYP_002138707 
Protein GI197118280 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTT TGATAAAAGG CGGGCGTGTG ATTGATCCCT CTCAGGGGAT AGATGCGAAC 
CTCGATGTCC TGATCGCCGA CGGCGTCGTG CTCGAACTGG GGCAGGGGCT TGCCGCGCCG
GAGGGAACTC CGGCCATCGA CGCCAGCGGG CTGATCGTGA CGCCTGGGCT CATCGACATG
CACGTGCACC TGCGCGACCC GGGCCTGGAG TACAAGGAAG ACATCGCCAC CGGTAGCCGC
TCCGCTGCGG CGGGGGGCTT CACCTCGGTT GCCTGCATGC CGAACACCTC GCCGGTCATC
GACAGCAAGG CCATCGCTTC CTACATCATC AACAAGGCCA AAAGCGAGGC GCTGGTCAAC
GTCTTCCCGA TCGGCTGCAT CACCAAGGGG GGCAAGGGTG AGAGCCTCGC CGAAATGGGC
GAGCTCAAGG AAGCTGGTTG CGTCGCGGTT TCCGACGACG GCAAGCCGGT CTGCAACTCC
GAGCTGATGC GCCGCGCCCT CGAGTACGCC AAAGGGATCG GCATCGCCGT TATCTCGCAC
TCCGAGGATC TGGCTCTCGT GGGCGAAGGG GTCATGAACG AAGGGTTCGT CTCCACCGAG
CTGGGACTGA AGGGAATCCC CTGGGCTGCC GAAGACATCG CAGTGGCCCG CGAGGTGTAC
CTGGCCGAGT TCGCAGGAGC ACCGGTGCAC ATAGCGCACA TCTCCACCGT GGGATCGGCC
CGCATCATCC GCAACGCTAA GGCGCGCGGC GTCAAGGTCA CCTGCGAGAC CGCGCCGCAC
TACTTCACCC TGACCGACGA GGCGGTGCGC GGCTATGAAA CCAACGCCAA GATGAACCCG
CCTTTGAGAA GCGCCGCAGA CGTCGAGGCC ATGAAGGCCG GCCTTGCCGA CGGCACCATC
GACGCCATCG CCACGGATCA TGCGCCGCAC CACCCGGACG AGAAGGACGT GGAATTCAAC
GTCGCCCTGA ACGGCATCGT AGGCCTTGAG ACCTCGCTTT CCCTCTCGCT CAAGCTCGTC
GAAGAGGGGC GCCTGGACCT GAACCAGCTG GTGTCGCTCA TGTCCTGCAC CCCGGCGAAG
ATCCTCGGTC TCGACCGCGG CACCTTGAAG GTCGGGGCCG TGGGCGACGT CACCATCATC
GACCCGGCCA AGGAGTGGCA GGTAGAGGCG GCGAAGCTGG AGTCGAAGTC CAAGAACTCC
CCCTTCCTTG GCTGGAAGAT GAAGGGGAGG GCGGTCTACA CCGTCGTGAA GGGGCAGGTG
GTGTACCAGG CGTAA
 
Protein sequence
MNLLIKGGRV IDPSQGIDAN LDVLIADGVV LELGQGLAAP EGTPAIDASG LIVTPGLIDM 
HVHLRDPGLE YKEDIATGSR SAAAGGFTSV ACMPNTSPVI DSKAIASYII NKAKSEALVN
VFPIGCITKG GKGESLAEMG ELKEAGCVAV SDDGKPVCNS ELMRRALEYA KGIGIAVISH
SEDLALVGEG VMNEGFVSTE LGLKGIPWAA EDIAVAREVY LAEFAGAPVH IAHISTVGSA
RIIRNAKARG VKVTCETAPH YFTLTDEAVR GYETNAKMNP PLRSAADVEA MKAGLADGTI
DAIATDHAPH HPDEKDVEFN VALNGIVGLE TSLSLSLKLV EEGRLDLNQL VSLMSCTPAK
ILGLDRGTLK VGAVGDVTII DPAKEWQVEA AKLESKSKNS PFLGWKMKGR AVYTVVKGQV
VYQA