| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1735 |
|---|
| Symbol | |
|---|
| ID | 6781723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 1998007 |
|---|
| End bp | 1998966 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642767727 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_002138547 |
|---|
| Protein GI | 197118120 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAC GCGAATTTAT CAAGACGACA GGCCTCGCGC TGGCCGCGGC GGCAGTACCG
GGTTTTGCCT TTGCGGGAGG CGCCAAGGTG AACATCAAGG TAGGCTACCT CCCCATCACC
GACCACCTGT TGATGATCGC CAGCGAGCGG GAACAGTTCA AGAGCGTCGG CATCCAGCCG
GTCAAGTTCT CCTCGTGGCC CGAGATCTCC GAGGCCCTCA AGGTGGGCGC CATCGATGCG
GCCTTCCTGC TGACCCCCAT CGGGCTGACC CTGCGCCAGA AAGGGGTGCC GGTCAAGGTA
GTGCTCCTGG GGCATCGTAA CGGCAGCGCC ATCACCGTGA AAAACAGCAG CGAGATCAAC
CGCATCGAGG ACCTGAAGGG AAAAACCATC GCCGTTCCCA GCCCGTTTTC CACCCATAAC
CTTCTGCTGC GCAAAGTGCT GACCGAGAGG CACCTCGACC CGAACAAGGA TCTGAAGATC
ATCGACATGG CGCCCCCCGA GATGGTGAAC GCCCTGGCGA CCGGACGCAT CGAAGGTTAT
ATCGTCGCCG AACCGTTCGG CGCCCAGGCA GAGGCCCAGA AGGTCGGCAA GGTGCTCATG
CTCTCCAAGG ACATCTGGCA CGACCACATC TGCTGCGTAC TCAACGTGCG CGAGAGCGTG
ATAGCGAAGT ACCCCGAAGC GGTCCAGGAG ATGGTAGCCG GCTTCCTGCG CACCGCCTCC
TTCATCGAGA CCAGCCCGGT GCTGGCGGCG AAGGGTTCGA CGAAGGTACT CGGGCAGAGG
CCGGAGATCG TCGAGAGGGT GCTCACCTCC CCCCGCGACC GTCTGAGCTT CCAGAACCTC
GTTCCCAACA AGAAGGATTT CGCGGCGACC CAGGACTACA TGATCAAGTT CGGCGTCGCC
AAGCAGAAGA CCGACCTCGC CGGCTACCTT GACGACCGCT TCGCACGGAA GGCGGTGTAA
|
|---|
| Protein sequence | MNRREFIKTT GLALAAAAVP GFAFAGGAKV NIKVGYLPIT DHLLMIASER EQFKSVGIQP
VKFSSWPEIS EALKVGAIDA AFLLTPIGLT LRQKGVPVKV VLLGHRNGSA ITVKNSSEIN
RIEDLKGKTI AVPSPFSTHN LLLRKVLTER HLDPNKDLKI IDMAPPEMVN ALATGRIEGY
IVAEPFGAQA EAQKVGKVLM LSKDIWHDHI CCVLNVRESV IAKYPEAVQE MVAGFLRTAS
FIETSPVLAA KGSTKVLGQR PEIVERVLTS PRDRLSFQNL VPNKKDFAAT QDYMIKFGVA
KQKTDLAGYL DDRFARKAV
|
|---|
| |