Gene Gbem_1549 details

Gene Information

• Locus tag: Gbem_1549
• ID: 6781537
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1794723
• End bp: 1795283
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642767543
• Product: putative type IV pilus assembly protein PilP
• Protein accession: YP_002138363
• Protein GI: 197117936
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3168] Tfp pilus assembly protein PilP

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA GCCTAAATAA CATCGCGCTG ACGTTGCTGC TGCTGGCTCT TTGCGGCACC 
GGTTGCAAGA AGGAAGAGGC TCCGCCTCCA CCTCCACCTC CGCCCGCCGC ACCCAAGCCT 
GCGGCACCCA AGCCCGCAGC ACCGGTGCAG GCACAGCGCT CCTCGGTGAG CAGCACCGGC 
GCCTCACTGG ATTTCAGCAA AAAGACCGAC CCGTTCAAGT CGCAGGCCCC CGTGGTGGCG 
AAACCGCAGC CTGGATCTCC GGGGACCGGG GGAGGAGGCG GCGCGGTGTC ACCTGCCGCG 
GACCTTCTCC CGATCCAGAG CTATGAAGTG TCGAAGTTCA AGGTGGCAGG GATCATCGCC 
GGCCTCAGGG AGAACCAGGC GCTGGTGATC GACCCCAACG GCAAGGGTTA TGTAGTGAAA 
GCAGGCATGC AGATCGGCAA CGCCAACGGC CGTATTTCCA GGATCACTTC CTCAAGCGTG 
GAGGTGGTGG AGCGTTACCG CGAAGGCGGT GGCCGCCCCA AGAGCAGGAC TATCGTGCTC 
ACGCTGCCCA AGAAAAGGTA A 

 

Protein sequence

MKKSLNNIAL TLLLLALCGT GCKKEEAPPP PPPPPAAPKP AAPKPAAPVQ AQRSSVSSTG 
ASLDFSKKTD PFKSQAPVVA KPQPGSPGTG GGGGAVSPAA DLLPIQSYEV SKFKVAGIIA 
GLRENQALVI DPNGKGYVVK AGMQIGNANG RISRITSSSV EVVERYREGG GRPKSRTIVL 
TLPKKR