| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1330 |
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| Symbol | |
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| ID | 6781317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1534130 |
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| End bp | 1535011 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642767324 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002138145 |
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| Protein GI | 197117718 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0166738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATCT CCCCGTATCG CGCCACAGTC ACCATGCCCC GGATGGAGCA GCCGTACCCG
TCGGTACTGG ACTTTCTGGT CGGGCGTTTC CCAAAGGTAA GTCGCAGCTG CTGGGAGCGG
CGCATAGCCC AGGGAAAGGT CCTGGGCGAG GATGGGACTC CCATCACCAG CGCCAGCAGC
TACGCTCCCC AAAAAAGGAT CTTCTACTTC AGGGAGATCG AGAATGAGAA GGTGATCCCC
TTTGCCGAGG AGATCTTGTT CCAAAACGAC GAACTCCTGG TGGCATGCAA GCCGCATTTT
CTGCCGGTGA CGCCGGGGGG AGAGTACCTC AGCCAAAGCC TCCTGCACCG GTTGAGGGAA
TCTACCGGCA TCCACGACCT GGTACCGCTG CACAGGATCG ACCGCGAAAC CGCCGGGATC
GTCCTTTTCT CCGCCAACCC GAAAACGCGC GGCCGTTACG GCGAGTTGTT CCGGGAGGGG
AGCATCGAAA AGAGCTATGA GGCGATATCG GCAGCTCCGG TAGAGCCGGG GCAGGCGGAA
TGGCTGGTGG AAAACAGGCT GGTGCATGGG GAACCGTGGT TCACCATGCG AACGGAGCAA
GGTCCCCCCA ACGCCCGTTC GCTCATCCGG TTGGTGGAGC AACGAGATGG CGCTGCTCGT
TTTCAACTGA CACCGGTGAC GGGGAAGACT CATCAACTGC GGGTCCACAT GAGCGGGCTC
GGGTTGCAAA TTCTGCATGA CCGCCTTTAC CCGCAACTTC AGCCCCAACA GCCCGACGAC
TTCGACCGGC CGTTGCAACT CCTGGCAAGG CGCGTGCGGT TTCGGGACCC GCTCTCGGGG
AGGCTTTTGG AGTTCGAGTC GGCGCGCAGG CTTTTGTGGT AA
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| Protein sequence | MGISPYRATV TMPRMEQPYP SVLDFLVGRF PKVSRSCWER RIAQGKVLGE DGTPITSASS
YAPQKRIFYF REIENEKVIP FAEEILFQND ELLVACKPHF LPVTPGGEYL SQSLLHRLRE
STGIHDLVPL HRIDRETAGI VLFSANPKTR GRYGELFREG SIEKSYEAIS AAPVEPGQAE
WLVENRLVHG EPWFTMRTEQ GPPNARSLIR LVEQRDGAAR FQLTPVTGKT HQLRVHMSGL
GLQILHDRLY PQLQPQQPDD FDRPLQLLAR RVRFRDPLSG RLLEFESARR LLW
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