Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_1322 |
Symbol | |
ID | 6781309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 1524120 |
End bp | 1526003 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642767316 |
Product | TPR repeat-containing protein |
Protein accession | YP_002138137 |
Protein GI | 197117710 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.993956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTACGA AAAAAGAAAA AATTCTGGAG AGTGCCCAAC GCTTCGTCCT TAAAGGGCAG ATCGACAAGG CGATCAAGGA TTACCAGCAA GTGGTGGCCT TGGATCCCTC CGATGTCCGT TACCGTCAAA GGCTGGCCGA ACTCCTGGTG CGGGACCGCC GCAAGGAAGA GGCGATCCAG GAGTACGAGT TTATCGGCAA GCATTACGCT GAAAACTCCT ACTTCCTCAA GGCGATCGCC ATCTATAAGC AGATACAGCG TCTTTCGCCG GGCAACACCG CGGTAGCGCT CACCGTCGCT TCCCTGAACC ACCAACAGGG GCTGATCGGC AACGCGCTGG CCGAGTACGG TCAGGTGGCG GCCCAGTTCG AAAAAGAAGG CGCCCTCAAA GAGGCGCTCA AGGTCGTGGA ACAGATGCTG GGCGTGGATG CCGAACACTG CGCCACTCGC CTCAAACATG CCGAACTCCT CTTCGCTACC GGTGCCAAGG ACGACTCCTA TTCGGCCTTT GAGCAACTGG CGGCATCGCT GCGCGCACGC GGTCACTCAG CGGATGCGGA CGTGGTCGCC TTCCGCCTGC AGCAGCTTTT CCCCGGCAAG CCGGGGGAAT CTTCCGCCGC TGCTCCACTG CAAATGGACG CCGCAACGCC GGGCGCCTTG GAAGCGCTCG ATTGTGGCCG CGATATTCCC GGCGTGGCTG CTGACGTCCC GGCGCCCTGG GAGAGCGGGG GGGAAGGGGA TGCCGGCGAA GAACTCCCCG ATCCTCTCGA TCCGCCCTTG CCGGCAGTAG CCGCGGAACC GGCACCCCCC GTCGGCTCCT GGGAGCCGGA ACCGGCTGTC GCCACCGCCG CTACCGACGA AGCTCCCGCG CTTGCCTCAT GGGAAGAGGA GATAGAGCTC GACCTGGACG ACGATCTGCC GCTGGAGAGC GCCCCCGTGG CGTCCTCCGA TTTCCAGGCC GCATCCCATG TGCCACACGC TCCCGTTTCT GAAGCGAAGC AGCCTGCCTT GCCGCCCGAG GCGCAGGACG GGATCGACCT GCAGCTCGAT TTTTCCCTGG AACTCGACTT CGATGAAGTG GTGCAGTCGC TGGAAGAGGA GCCGCTGGAC CAGGAGGCGG CCCCAGTGGT CGAGCTGGAT ATCGACGCTG CGGCGTTGGA GCTGAGCCTG CCTCAGGAAC CGGGCGCGGA CCTCCCCTGG GAAGAACAGC CGGAATCGGA TGAGCTTTCC GCGGCGGAAG ACCTGCCGGA ACTGGAAGAT CTCCCTGAAC CGGAGCAACT TGCGGAAGCG GAGGAGCTGC CCCAAGTGCA AGCACCGGAG CTTATGGAGG TGCAGGACTG GGAGGCCCCT ACGGAGGCGC CGCAGGACGA AGAGCCAGCT CGGATGGACG CGGCGGCGCC CGCCCTCTCG CAGCGGTTGC GCGGGTGGGA GGAGATCTAT CCGGAGAGCG GGGATGCTCC CGAGGCGGAG TTGGACATCG AGGAGCTGGA GTCGCACTAC GATCTGGGGA TCGGCTATAA AGAGATGGGG ATGTGCGGCG GCGCCATCAA GGAGTTCGAC ACCGCTGCGC GTAACCCTCA CCGGCGGCTG GACTGCCTTA CGCTGCAGGC CATCTGCTAC CGTGAAAAGG GGGAGGCGGA CCGGGCCGAG GACTTGCTGC GTCGAGGCCT ATCCCTGGAG GTGATCTCCC AGCCGGAGCG GGTCTGCATC GCCTACGAGC TGGCCGTGCT GCTGGAGGAT TCGGGAACGC CGGACGAGGC GATAGAGCTG TACCGGGAGG TTGTTCGCGC CAACCCCGGG TGCCATGACG CCTCTCGGAG GCTCTCCGCT CTTTCCGGGG AGGAGCGGCT GGACATCATC GAACTGGAAC TGGAAGAAGG GTAG
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Protein sequence | MATKKEKILE SAQRFVLKGQ IDKAIKDYQQ VVALDPSDVR YRQRLAELLV RDRRKEEAIQ EYEFIGKHYA ENSYFLKAIA IYKQIQRLSP GNTAVALTVA SLNHQQGLIG NALAEYGQVA AQFEKEGALK EALKVVEQML GVDAEHCATR LKHAELLFAT GAKDDSYSAF EQLAASLRAR GHSADADVVA FRLQQLFPGK PGESSAAAPL QMDAATPGAL EALDCGRDIP GVAADVPAPW ESGGEGDAGE ELPDPLDPPL PAVAAEPAPP VGSWEPEPAV ATAATDEAPA LASWEEEIEL DLDDDLPLES APVASSDFQA ASHVPHAPVS EAKQPALPPE AQDGIDLQLD FSLELDFDEV VQSLEEEPLD QEAAPVVELD IDAAALELSL PQEPGADLPW EEQPESDELS AAEDLPELED LPEPEQLAEA EELPQVQAPE LMEVQDWEAP TEAPQDEEPA RMDAAAPALS QRLRGWEEIY PESGDAPEAE LDIEELESHY DLGIGYKEMG MCGGAIKEFD TAARNPHRRL DCLTLQAICY REKGEADRAE DLLRRGLSLE VISQPERVCI AYELAVLLED SGTPDEAIEL YREVVRANPG CHDASRRLSA LSGEERLDII ELELEEG
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