| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_1284 |
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| Symbol | |
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| ID | 6781271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 1481266 |
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| End bp | 1483872 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642767278 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_002138099 |
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| Protein GI | 197117672 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGAC CAAGACTGAT CTTAACCGTG ATGCTGGTGG CACTGGCTCT CTCGGGCTGC
ACGTCCGGCC GCACCGCTTT CAGCAAGGCG GAGAAGCTGG AGCGAGAGGG AAACCTGGAC
GCCGCGCTGG TGAAGTACGC CGAGGTAGCC GCTGCCAACC CCGATATCGG CGAGTACCGG
GTGAAGCTTC TGAACGTCAC CGAGACTGCG GCTCGCGCGC ATTTCAAGAA GGGGGAGGAG
TTCTTCGCCA AGAAGAACTA CGACGAAGCC CTCAGGGAGT TTCAAAGCGC CTACGCCATG
GACCCCACGC ACGTCCTGGC CAAGAATCAG GCCGACCAGG TGCTTAAGCT GAGAAACGCC
CAGACCTACC TGCAGGAGGG GCTCGACTTC GAGAAGAACC GCAAACCGCG GGAGGCGATG
ATCGCCTTCA AGCACGCCCT CGAATTCGAC CCGAGCAACA AGGAGGTGAA GGAAGGGCTG
GATCGCATCA TCGCCAACAA GCGCCAGAAG CTGGACGGTT TCGAGCTGAA CCTGAAGTCG
AACAAGCCGA TCACCCTCAA GTTCCGCGAT GCCAAGCTCA AGGAGATCTT CACCATCCTT
TCCCAGCTCT CCGGCATCAA CTTCGTCTTC GACGACGCGG TGAAGGACGT GAACATCACG
CTGCACCTGG AGAACGGCTC ATTCCAGCAG GCGATGGAAC TGATCACCGG GATGCAGAAG
CTGGACAAGA AGATCCTGAA CGAGAGCACC ATCATCATCT ATCCGAAGAC CCCGGACAAG
GTCAAGCAGT ACGAAGAGCT CTTCCTGCAG ACCTTCTACC TGAACAAGCT GGACGCGAAG
AAGGCGGTCA ACCTGGTGCG CACCATGCTC CAGGTGAAGA AGATCTACGT GAACGAGGAG
GCGAACGCCC TCGTCATCCG CGACACCCCC GAGGTCATCG AGGTGGCGCG CAAGATTCTG
GAGGCCAACG ACGTTCCCGA TGCCGAGGTG CTCCTCGAGG TGGAGGTGTT CGAGCTCTCC
AAGCAGAACG CCGAGACCTT CGGACTGCTC CTCTCCCGGT ACGCCACCTC CCTGGGGGTG
ACAGCTCCGG GAAGCACCGG CACCAACCCG TTCCTGGCTG ACACGCTGGG AGCAGTCACC
ACGACGACCA CCACAGGTAC GACCACCTCT TCCGCTGGGC CGTCCAACCT GTTGAACGTG
TTCAACCTGA GGGGTTATAA CGGCTACTTG ACCGTACCCA ACGCCACCTT CAACTTCGGC
AAGACCCTCT CCAACGGCGA GACCCTCTCC AACCCGAAAA TCAGGGTGAA GAACCGAGAG
AAGGCGAAGT TCAACGTCGG CACCAGGGTC CCTATCACCA CCACCTCTTC GCCTTCCGGC
GGCGGCGTCA GCGTCAACGT CCAGTACGTC GACGTCGGGG TCAAGGTGAA CGCCGAGCCG
ACCATCCAGC TCAACAACGA GGTCGCCATC AAGCTGGGGC TCGAGGTCAG CTCCATCCTC
AACGAGAAGA CTATCGGCAC CGACCAGGCC ACCACCGTGG TCACCATCGG CACCAGGAAC
CTCGACACCG TGCTCTCACT CAAGGACGGC GAGACCAGCA TCATCGGGGG GCTGATCCAG
AAGACCCAGA CCGACAGCAA GAGCAAGGTC TTCTTGTTGG GCGACATCCC GATCCTCGGC
CCTTTGTTCA GCAACACCAG CGACAAGAAG GATAAGACCG AGCTGCTGCT TGCCATCACC
CCCAGAATCG TGCGCGGCGT GACCGTTCCC GACAACGACG TCGCCGCTTT CTGGTCCGGC
CGCGAGGACG AGCCTTCGTC GCATCAGCCG TATTCCTCCT TCATGGAGCC TGACTTCGTC
AACCCCGAGG CCGCCGAGGG TGCCGCGGCC CCTGCCGCAG CCAAGCCCGC TCCCAGGGCG
CTGCCTAACC TGGTGCCGGT CCAGAAGATC GTGCCGGCTC CTGTTCCGGC CCCGGCTCCT
GCTCCTGCCG GCGCTCCTGC TCCTGCTCCT GCCGGCGCTC CGGCCCCGGC CCCAGGCGGA
GCTGCCGCGG CAGTTCCAGC ACCTGCCCCT GGCGCCGTTC CGGCCGCAGG GGACGTCCCG
GTGCCCGCGC CTGTCCCTGT CCCTGTGCCC GCTCCGGTAC CGGTACCGGT TCCCGCTCCC
GCTCCAGCCG CACCCGCAGC CGCGAAACAG CCGCTTCTGA CCGATTCGCT GATCGCGCTG
AGCCTTCCGG CCAAGGTGAA GCTGAACGAC CAGTTCAGCG TGCAGGTGAA TGGATCAGGG
ATGAGGGATT TGTACAAGGC GGTCTTCGTG CTCTCTTACG ATCCAAAGCT CCTGGACGCC
ATTTCGCAAT CCGAGGGGAA CCTCTTGAAA CAACCCGGGA AGCCTTCCAC TTTCCAGGCA
TTCGCGGACA AGAAAAAGGG TGAGATCTGG ATGTCCGGCA TGCGCGAGGA GCCGACCGGA
ACCGCCAACG GCATCCTGGC CAACATCAGC TTCAAGGCGA TAGGGACGGG ATCGGCCGCT
GTCTCCGTGA ACAACACCAA CTTCAGCAAA AAGACTGGCG AGGATATCCC GGTCACCGCC
TTCAAGTCCG TAGTGGAGGT ACAGTAG
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| Protein sequence | MHRPRLILTV MLVALALSGC TSGRTAFSKA EKLEREGNLD AALVKYAEVA AANPDIGEYR
VKLLNVTETA ARAHFKKGEE FFAKKNYDEA LREFQSAYAM DPTHVLAKNQ ADQVLKLRNA
QTYLQEGLDF EKNRKPREAM IAFKHALEFD PSNKEVKEGL DRIIANKRQK LDGFELNLKS
NKPITLKFRD AKLKEIFTIL SQLSGINFVF DDAVKDVNIT LHLENGSFQQ AMELITGMQK
LDKKILNEST IIIYPKTPDK VKQYEELFLQ TFYLNKLDAK KAVNLVRTML QVKKIYVNEE
ANALVIRDTP EVIEVARKIL EANDVPDAEV LLEVEVFELS KQNAETFGLL LSRYATSLGV
TAPGSTGTNP FLADTLGAVT TTTTTGTTTS SAGPSNLLNV FNLRGYNGYL TVPNATFNFG
KTLSNGETLS NPKIRVKNRE KAKFNVGTRV PITTTSSPSG GGVSVNVQYV DVGVKVNAEP
TIQLNNEVAI KLGLEVSSIL NEKTIGTDQA TTVVTIGTRN LDTVLSLKDG ETSIIGGLIQ
KTQTDSKSKV FLLGDIPILG PLFSNTSDKK DKTELLLAIT PRIVRGVTVP DNDVAAFWSG
REDEPSSHQP YSSFMEPDFV NPEAAEGAAA PAAAKPAPRA LPNLVPVQKI VPAPVPAPAP
APAGAPAPAP AGAPAPAPGG AAAAVPAPAP GAVPAAGDVP VPAPVPVPVP APVPVPVPAP
APAAPAAAKQ PLLTDSLIAL SLPAKVKLND QFSVQVNGSG MRDLYKAVFV LSYDPKLLDA
ISQSEGNLLK QPGKPSTFQA FADKKKGEIW MSGMREEPTG TANGILANIS FKAIGTGSAA
VSVNNTNFSK KTGEDIPVTA FKSVVEVQ
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