Gene Gbem_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1216 
Symbol 
ID6781200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand+ 
Start bp1408331 
End bp1408948 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content64% 
IMG OID642767207 
ProductSCP-like extracellular 
Protein accessionYP_002138031 
Protein GI197117604 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.616786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTC TGCTGAGGAT CTGGATCTTG TTGCTGTTGT CGGCGACGGC CGCGCAGGCC 
TCGCGCGGGG AGATGGCTCG CGAGTTCCTG GCCGAGACCA ACGTCGCCCG CACCGACCCC 
GCCCGCTATG CCGGCTACCT CAAGGAGATG AGGGGGAACT TCATCGGGAA GGGGTACCGG 
CTCCCGGGTT CGATGAACCT GGTAATGACC AACGAAGGGG TGGCCGCCGT CGAAGAGGCG 
ATAGCCTTTC TGTCCAGGCA GCGTCCCGTG TCCGCGCTTT CCTGGTCTCC CGGGCTGGCT 
AAGGCGGCCG GTGAACTGGT CCGGGAACAG GCGGCCTCCG GCACAACGGG GCATGACGGC 
GCAAGCGGCG ACCTGAAACA GCGCATCGAG CGCTTCGGCA CCTGGCAGGG GAGCATCGCC 
GAGAACATCG GCTACGGTCC CGATACGGCG CGCCGGATGG TGATGGAGCT GATCATAGAC 
GACGGCGTAT CCGGCCGCGG ACACAGAAAG AACATCTTCG AGCGTTCCTT CGGCACGGCG 
GGCGCCGCCT GCGGATCGCA TCCTTTGTAC CGGAACATGT GCGTCATGGA CTTCGCCGTC 
GGATACAAGA ACAAGTAG
 
Protein sequence
MKTLLRIWIL LLLSATAAQA SRGEMAREFL AETNVARTDP ARYAGYLKEM RGNFIGKGYR 
LPGSMNLVMT NEGVAAVEEA IAFLSRQRPV SALSWSPGLA KAAGELVREQ AASGTTGHDG 
ASGDLKQRIE RFGTWQGSIA ENIGYGPDTA RRMVMELIID DGVSGRGHRK NIFERSFGTA 
GAACGSHPLY RNMCVMDFAV GYKNK