Gene Gbem_1124 details

Gene Information

• Locus tag: Gbem_1124
• ID: 6781102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter bemidjiensis Bem
• Kingdom: Bacteria
• Replicon accession: NC_011146
• Strand: +
• Start bp: 1300615
• End bp: 1302591
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642767110
• Product: cytochrome C family protein
• Protein accession: YP_002137940
• Protein GI: 197117513
• TIGRFAM ID: [TIGR01905] doubled CXXCH domain

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.932844
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATGC ACGATATGCG TAAGGGCAGA AGAATTTTGG TTTTTATGCT GACGGCGCTG 
CTGGCGGTGA TGGTTTCGTT CACCGGTAGC AGGACAGCCC TCGCCGCAAA GGCGTTTGTC 
CGAAAAGATT GTTCTGACTG TCACAAAAAA TTCGACGACA AATTTTCCTC TGTGAAGTAC 
GTGCACCCGA TGGTGCACGA CAAGAAGTGT GAGGACTGCC ACCTGCGTCA CGGCATTATC 
CCGAAGCTGC TTCTCAAGCA CGATGGCAAC CAACTCTGCC TGAACTGCCA TCCCGCCAAC 
AAGATAGGTT TGAACAAGCC CAAGGTGCAT ACCCCCATTG CAAAGGGTAA ATGTACGACC 
TGTCACAATC CCCATGGTTC TGATTCCCGT TATTTCATGA AGTCAGCTGG GAACGAAGCC 
TGCTTCCAGT GCCATAAGAA ATCGGTATTT GAAAAGAAGG TCGTGCACAA GGTGCTCACC 
GACAAAGGGT GCAGTGCCTG TCATGTGGCC CACAGCTCGG ATTACAACAA CCTGCTCTCC 
TCGGAGGTGC CAAAACTTTG CCTGAACTGC CACGACAAGG GTAGTGCCTC CTTCAAGAAG 
GCGCACGGCA ACTACCCGGT CGACCAGAAA AACTGCACTG TATGCCACAA CCCGCACGCC 
TCTGATCAAC CAAAGCTGCT CAAAGGCAGC GTGCACAATC CTGTTGCCTC CGCCGGTTGT 
GACGGCTGTC ACAACCCGCC CAATTCGGCC AATCCCTTCG GTGTTTCTCT GAAGAAGGGG 
GCACTGTGCG CCCAGTGCCA CGAAAGCGCC TCCCTTAAAG GGGGCGGTAC CGTCGAGCAT 
ATGCCATTTA AGGAAGGTGA CTGTCTGTTG TGCCACAACC CGCATGCTTC AGAGCAGACA 
AAGCTGTTGG TGCAGGAAGG CAACGATCTC TGCAAGATCT GTCATGCGTC GGAAACGGCA 
TCCCACCTTT TCAAGCACAA GGCTGTGACC GATGGCAAGG GTTGCCTGTC CTGCCACAAA 
CCGCACGCTG CGGCCAAGAA GAAGCTTCTC GTCGCCGAGG GCGCCGACCT TTGCTACACC 
TGCCATGCGA AGACCAAGGA GGCGCTGAAA GGCAAGGACG TGCACGAGCC GTTCTCCGGC 
GGGGAGTGCA GCAGTTGCCA CGATGCACAC GGATCCAACT TCCCCGGCAT GATGAAGGAC 
CGCATGGATA CCGTCTGCTT CAATTGCCAC AGCGACGCGG AAACCCGGTT CAAGAAGAAT 
TACACCCACA AGCCGGTCCA GGATTCCAAC TGTGCTGCCT GTCACAAGCC GCACTCCTCC 
GATCAGAAGA AGCTCCTGAA GGGTGTGGGT GCACAGTTGT GCTCGTCATG CCACGCCGAA 
CTCATGAAGC CTATAAGCCA AGGGATCAAC CACCAGCCCT TCACCGATGG GGACTGCCTT 
GGCTGCCATG ATCCCCATGC CAGCAACATC CAGGGGATGA TCACCAGCAA CCAAAGCGAA 
CTGTGCGTTA ACTGCCACAG CGATCTCAAC AAAAACGCGA AGGATGCCAA GAGCAACCAT 
GCGCCCTTCA CCAAGGGGGA CTGCACCAAG TGCCACAGCC CGCACAAGGC GAAACTCAAC 
AAGCTGCTTC TTGCGCAGAG TCCCGACCTC TGCGTCAACT GCCATAAGGA CATCAAGGAG 
AAGATCGCCC GGCAAAGGCC GCACCCCCCC GCGCAGAAAG ATTGCTCGAC TTGCCACCTG 
CCGCATCTCT CCAAGCAGAA GTCTCTTCTG GTCGAGCCGT TGCAGACGAT GTGCTCGGAA 
TGCCATGAAG TCGAAAAGCC TGCCTTCGTC AAAGCTCATA TAGGCATCAA GGCCGCCGAC 
ATGGATTGCA TCAGCTGCCA CAGCCCGCAT GCTTCGAACG ATCCCAAGTT TTTCAAGGAT 
GTCGTGCATC CTCCGTTTGC CGGCAGAACG TGCGATGACT GCCATATAAA ACAATAG 

 

Protein sequence

MKMHDMRKGR RILVFMLTAL LAVMVSFTGS RTALAAKAFV RKDCSDCHKK FDDKFSSVKY 
VHPMVHDKKC EDCHLRHGII PKLLLKHDGN QLCLNCHPAN KIGLNKPKVH TPIAKGKCTT 
CHNPHGSDSR YFMKSAGNEA CFQCHKKSVF EKKVVHKVLT DKGCSACHVA HSSDYNNLLS 
SEVPKLCLNC HDKGSASFKK AHGNYPVDQK NCTVCHNPHA SDQPKLLKGS VHNPVASAGC 
DGCHNPPNSA NPFGVSLKKG ALCAQCHESA SLKGGGTVEH MPFKEGDCLL CHNPHASEQT 
KLLVQEGNDL CKICHASETA SHLFKHKAVT DGKGCLSCHK PHAAAKKKLL VAEGADLCYT 
CHAKTKEALK GKDVHEPFSG GECSSCHDAH GSNFPGMMKD RMDTVCFNCH SDAETRFKKN 
YTHKPVQDSN CAACHKPHSS DQKKLLKGVG AQLCSSCHAE LMKPISQGIN HQPFTDGDCL 
GCHDPHASNI QGMITSNQSE LCVNCHSDLN KNAKDAKSNH APFTKGDCTK CHSPHKAKLN 
KLLLAQSPDL CVNCHKDIKE KIARQRPHPP AQKDCSTCHL PHLSKQKSLL VEPLQTMCSE 
CHEVEKPAFV KAHIGIKAAD MDCISCHSPH ASNDPKFFKD VVHPPFAGRT CDDCHIKQ