Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0681 |
Symbol | |
ID | 6783514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | - |
Start bp | 804484 |
End bp | 806403 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642766653 |
Product | response regulator receiver protein |
Protein accession | YP_002137504 |
Protein GI | 197117077 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.657626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAACACC GCATCCTTCT GGTCGAGGAC AACGACCGCC TGGCGGGGAT GCTGACCAGC TTCCTCGCGT CGCTCGGGCA CGAGGTGCTA GCTTTGGCCG ACGCCGAGAC GGCGCTAGCC CTCCTCGGGA AGGAAAAAAT CGACCTGCTG GTCCTGGACC TGAAACTCGC CGGGATGAAC GGGGTGGAAC TGCTGCAGCG GGTGCGCAGG AACCCGGAGC TGAAAGAGCT CCCGGCAATC ATCATGACCG GCGTTTTCCG CGGCGAGGGA TACGCGCGGG CAGCCGCGAA GCTTGGGGTA AAGGCGTATC TGGAGAAGCC GTTTGGCAAG GACGCCTTTC TTGAGGCAGT CGGCGCCGCC CTCGCCCCGC CGCCGGGACC AAGGGAGTTA TCAGCCATGC TGCTCGACCT CTACCATAAC GGCAAAAGCG GCGTACTTCA GTTGGGAGGC GGGACGCGCG TCGTTTTTCT CGCCGGGGAA CCCGCCTCTT TCTCCTCGCC CGGGTTCGTC CCGTTCCTGT TGGCGGAGGG GCGCCTGTTG CGCGGCGACC TGGAGAAGTA CCCGCTCAGC CGGCCAGGCA AGATGCCGCT TTGCGAGGCG GGGCTTTTGA ACTACGACGA ACTACAGGAG CAGTCGCGCC TGTTCCTCTC CAAGGTCCTG GTCGAGGCGG TGCTGCAGAA TCAGCCCCCG CAGTTTCTGC CGGACGTAGG CGCCATCGAG CCCCCGCTCA CGCCCCTTTC GTTGCCGCGC CTGCTGTACC AGGCGGCGAA ACAGGGGGCC GACCGTTTCG GGGCCGACAG CTTCCTGAAC CGTACCGGAG CGCTCTTCCC CTTGAGAACG GAGAGGTACT TCCGCCTAGC CAACCTGCTG GGGCTGGGCC CCGAGGAGAT AGGAGTACTG GAGCAGTTGG GGCAGGGTAA AAGCGTCCGG GAGATCTTCG CCTCAGCCCC CCCCGCGCGG CAGGCGTGGT TCCTCGATTT CCTGGTGCGG ATGGGCATGG TGAACCTCGC CCTGGAACCG GCCGAGGACC GGGATGCGGG TTTCCCCCAG AAGATGCTCT TCAACCGCCC GATCGAAGAG GTGGTCGAGG TGGAGGTCCA GGGGATGAGC TTCGAAGACC TGGTGGACGA GGTCTCGGAC TCCATCGACC TGGCGGTGGG CGAGACCGGC ATGGCCGCGC CGCTTTCGGC AAGCGAGATC GACTTCGAGC AGGAGGTCCA GCGCGACTAC GCCGCCATCC AGAACAAGAA CTACTACGAG ATCTTCGGGC TCTCCCAGGC TAATTTCAGC TTCGCGAGCC TCAAGGAATC CTATTTCTCC AAGACGCGCC AGTACTCCCC GGAAAAGTTC ATGCAGCTTT CCGGCGACAC CCTCTCCCGC GCGCAGGACG TCCTATCCCA CTACGCCAAC GCCTACAACA CCCTCTCCAG CGTCATCGCC AAGGAGCGCT ACGACGAGAT GCTGAACGCC AACGTGATCG GCCTCGGAGG GCGCCAGGAA GACGCACTCC AGGCGCGCAT ACAGTTCCAG TCCGGCAAGG TCTTCCTGGA GATGGAGGAC TACAAAAACG CCGAGCGCGC CCTGCAGGAT GCCTACACCC TCGACGCGGA GGACTCGCAG ACCAGCGCCT ATCTGGCCTG GTCCATCTAC AAGAACCCCG CCAACCACGG GTCTCAGGTC GCGCTGGAAA AGTGCCGCAT GCTCCTCTCC AAGAGCCTGC AGATGGGGCG CAGCGCCGAG GCTTTCGCCT TCCGGGGGTG CATGCTGCTG GACGAGGGAA GAGACGGGCT CGCCGAGGGT GAATTCCAGA AGGCGCTCAG GCTGAACCCG CAAGAGCGGC ATGCCCTGGG GGGGATGCGG CTGATCCGGG AAAGGCACGA AGCCGAGAAG AAGGGACTCT TCAAGAGGAT CTTCGGTTAG
|
Protein sequence | MKHRILLVED NDRLAGMLTS FLASLGHEVL ALADAETALA LLGKEKIDLL VLDLKLAGMN GVELLQRVRR NPELKELPAI IMTGVFRGEG YARAAAKLGV KAYLEKPFGK DAFLEAVGAA LAPPPGPREL SAMLLDLYHN GKSGVLQLGG GTRVVFLAGE PASFSSPGFV PFLLAEGRLL RGDLEKYPLS RPGKMPLCEA GLLNYDELQE QSRLFLSKVL VEAVLQNQPP QFLPDVGAIE PPLTPLSLPR LLYQAAKQGA DRFGADSFLN RTGALFPLRT ERYFRLANLL GLGPEEIGVL EQLGQGKSVR EIFASAPPAR QAWFLDFLVR MGMVNLALEP AEDRDAGFPQ KMLFNRPIEE VVEVEVQGMS FEDLVDEVSD SIDLAVGETG MAAPLSASEI DFEQEVQRDY AAIQNKNYYE IFGLSQANFS FASLKESYFS KTRQYSPEKF MQLSGDTLSR AQDVLSHYAN AYNTLSSVIA KERYDEMLNA NVIGLGGRQE DALQARIQFQ SGKVFLEMED YKNAERALQD AYTLDAEDSQ TSAYLAWSIY KNPANHGSQV ALEKCRMLLS KSLQMGRSAE AFAFRGCMLL DEGRDGLAEG EFQKALRLNP QERHALGGMR LIRERHEAEK KGLFKRIFG
|
| |