Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0479 |
Symbol | |
ID | 6783307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 579757 |
End bp | 580473 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642766449 |
Product | protein of unknown function DUF164 |
Protein accession | YP_002137304 |
Protein GI | 197116877 |
COG category | [R] General function prediction only |
COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGTAACA GTCTGAAGTC GTTATACGAA TTGCAGGAAA TCGACCTGAG GATCGACGGT CTGGACAGCG AGAAAGAGCA GCTTCTGAAC GAAGCCCAGG CACTCGAGGC GAAGCTTGCC GACGCGCGCG AGAAGATCGC GGCTAGGCGC GAGGAGGCGC GTACCCTGGA AGAGGAGAAG GGGGCGCTGG AGGCGAATCT GCAGGCCGAG GGCGAGAACA TCGCCAGGTC CGAGGCACAC CTCAAGGAGA TCAAGACCCA GAAGGAGTAC CAGGCGGTCT CCAAGGAGAT CTCCACCGCG AAGAAGCTGA TCGCCGAGCT GGAAGACCAG ATCCTGCAGA AGATAAACGC GATCGAGGAA GTCAACGCCG ACGTGACCAA GAAGGAGGCG GATCTCTCCG AGCTCGAGGG TAACGTTGCC GCTCAAAAAG GGGAAGTCGA GGCCAAGGTG CAGAGCCTCG ATTCCGGCAT CGCGCAGGAC GCCGCCACCC GCGAGCAGAC CGTCAAAGGG CTTCCCGCTT CCGTGATGAA GCGCTACAGC AGGCTGCGCG ACCAGCGCCG CGGCGTGGCC GTCGTCGAGG CGAGAGAAGG GAACTGCATG GGGTGCAACA TGCACCTGCC GCCGCAGCTC TACAACACCC TGTTCCGCGC CGACGACGTG ATCACCTGCC CGCACTGCCA GCGGATCCTG ATCATGAAGC AGGAAGTGCA GGACTGA
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Protein sequence | MRNSLKSLYE LQEIDLRIDG LDSEKEQLLN EAQALEAKLA DAREKIAARR EEARTLEEEK GALEANLQAE GENIARSEAH LKEIKTQKEY QAVSKEISTA KKLIAELEDQ ILQKINAIEE VNADVTKKEA DLSELEGNVA AQKGEVEAKV QSLDSGIAQD AATREQTVKG LPASVMKRYS RLRDQRRGVA VVEAREGNCM GCNMHLPPQL YNTLFRADDV ITCPHCQRIL IMKQEVQD
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