Gene Gbem_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_0439 
Symbol 
ID6783266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand- 
Start bp523014 
End bp523631 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content64% 
IMG OID642766408 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002137264 
Protein GI197116837 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCA CCGAGCAGGC AAAACAGCAG TGCCGGGCAC GGATCCTGGA GAAGGCATCC 
GAACTCTTTT GCGCCCGCGG CTTCGACCAG ACCACCACCC GCGACATCGC GCTTGCCGCA 
GGGGTCGCCG CAGGAACCAT GTTCAATTAC TTCCCCAGCA AGGAGACGAT GGCGATGACC 
ATGGTCTCCG ACGCGCTCGC CGAAGGGGAG GCGGAATTCC GGGGTCGCAC CTGCGGCGAG 
CTTGTCGAGG ATCTCTTCGG CTTCATCGCC TCGGGGCTTC GCAGGCTGCG CCCCCTGCGC 
CCTTTCCTCG GCCCCGTGCT GGAGCGCTCG CTAAGCCCGT TCCCGCGCAA GAACGTTTGC 
CCCGTGGGAG AGGCGGCGCG TCAGCGGCAC CTCGACTTCA TGCAGCAGAT CCTGGCCAGG 
CACGGGTTCA GCTCCGCACC GGATTACGTC GCCACGACCA TTTATTGGTC GCTCTACCTG 
GGTGTGCTTG CCTTCTGGAC CAGCGACCCG TCACCGAACC AGGAAGCCAG CCAGGCGCTG 
GTCGACTACT CGGTCCGTAC TTTTGTGCAT ATTATCTCCG GCAGCGCCGG GGTAGATGGA 
GGTGAGCATG TCCTGTAA
 
Protein sequence
MRITEQAKQQ CRARILEKAS ELFCARGFDQ TTTRDIALAA GVAAGTMFNY FPSKETMAMT 
MVSDALAEGE AEFRGRTCGE LVEDLFGFIA SGLRRLRPLR PFLGPVLERS LSPFPRKNVC 
PVGEAARQRH LDFMQQILAR HGFSSAPDYV ATTIYWSLYL GVLAFWTSDP SPNQEASQAL 
VDYSVRTFVH IISGSAGVDG GEHVL