Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbem_0408 |
Symbol | hemC |
ID | 6783234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter bemidjiensis Bem |
Kingdom | Bacteria |
Replicon accession | NC_011146 |
Strand | + |
Start bp | 483934 |
End bp | 484890 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642766376 |
Product | porphobilinogen deaminase |
Protein accession | YP_002137233 |
Protein GI | 197116806 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTGA AAGAGCTGAG AATAGGTACC CGCGCGAGCC AGCTCGCACT CTGGCAGGCA AACTGGGTCA AATCCGAGCT GGAAAAACGC TACCCGGACA TGACCGTCAC CCTCACCAAG ATCAAGACCA TCGGGGACAA GATCCTCGAC GTGCCCCTGG CTCAGGTGGG CGGCAAGGGC CTGTTCGTGA AGGAGATCGA GGAGGCGATG CTGCGCGGCG AGATCGACAT CGCGGTGCAC AGCATGAAGG ACGTGCCGAC CGAATTCCCC GAGGGTCTGG GCCTTTACTG CATCACCGAG CGCGAAGATC CGCGCGATGC GGTCATCTCC AACGGCGTCA AGTTCGCCGA CCTGCCGCAG GGCGCGCGTA TCGGCACCTC TGCGCTCAGG CGTCAGGCGC AGCTCCTCAA GGTGCGTCCC GACCTCGAGA TGGTCATCAT TCGCGGCAAC GTGCAGACAC GCATGGACAA GCTTAAGACC GAAGGGCTTG ACGCCGTCAT CCTCGCCGCG GCCGGCCTGA ACCGCCTGGG CTTTGCCGAT CAGATCACCG AGATGCTCCC GACCGATCTC TCCCTCCCCG CCATCGGCCA GGGCGCGCTG GGCATCGAGT GCAACCTTTC CAACCAGGAT GTGAAGGACG CCATCTCCTT CTTCAACTCT CCGGACACCA GCCGCGCCGT TCGTGCCGAG CGCGCTCTGC TGTGGCGCTG CGAGGGTGGC TGCCAGGTTC CCATCGCCGC CTTCGGCGAA GTGACCGGCG ACCAGCTGAA GCTGACCGGT TTCATCGCCT CCGTCGACGG CAAGGTTTCC GTCAAGGGAG TCGTGACTGG TCCTGCCGAC GACTGCGAGA AGCTTGGTGT GAAGCTCGCC GAGCAGCTCC TTTCCGAAGG TGGCCACGCC ATCCTCGCCG AGGTATACCA GCGTGAAGTC TCCCGGGAGA AGGAAATCCC GGTATAA
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Protein sequence | MALKELRIGT RASQLALWQA NWVKSELEKR YPDMTVTLTK IKTIGDKILD VPLAQVGGKG LFVKEIEEAM LRGEIDIAVH SMKDVPTEFP EGLGLYCITE REDPRDAVIS NGVKFADLPQ GARIGTSALR RQAQLLKVRP DLEMVIIRGN VQTRMDKLKT EGLDAVILAA AGLNRLGFAD QITEMLPTDL SLPAIGQGAL GIECNLSNQD VKDAISFFNS PDTSRAVRAE RALLWRCEGG CQVPIAAFGE VTGDQLKLTG FIASVDGKVS VKGVVTGPAD DCEKLGVKLA EQLLSEGGHA ILAEVYQREV SREKEIPV
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