Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3275 |
Symbol | |
ID | 7979237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 3304048 |
End bp | 3304791 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644800042 |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_002951181 |
Protein GI | 239828557 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000161203 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAA CCATCAGCCT GCGCGAACTG TTCGAAACAT TGCGGAAACG TTTAATGCTT ATCGTACTCA TTACTGCCTT AGCGACAATT ATAAGCGGCG TAGTCAGCTA CTTTTTTTTA ACGCCGATTT ATCAAGCATC GACACAAATT TTAGTCAACC AGGCAAAATC GGAACAACAG CTATACAATT ATAACGAAAT TCAAACGAAC GTGCAGTTGA TTAATACGTA TAGCGTCATT ATAAAAAGCC CGACAATTCT CGAAAAAGTA AAAGAAGAAT TAAACTTGGA CCTTACAGTG GATGAGCTCA ACGAACAAAT CCAAGTTTCA AGTGAAAAAG ATTCGCAAGT GTTCTCGGTG ACCGTTCAAG ACCCGGATCC TGCCATGGCC GCCAAAATTG CCAACAAAAC GGCGGATGTG TTTAAAAACG AAATCGTCAA AATTATGAAC ATCGACAACG TCACGATTCT TTCGAAGGCC GAAGTAAAAG AGAATCAGGC GCCTGTGAAG CCGAAACCAA TGTTGAACAT GGCGATTGCC TTCGTCGTTG GACTGATGAC AGGCGTTGGA CTTGCCTTTC TACTAGAATA CTTAGATAAC ACGATCAAAA CCGAAACCGA TGTCGAAAAA CATCTTGGTT TGCCAGTACT CGGCGCGGTA AGCATCATTT CGGCCGAAGA ATCGAAAAAA GCGAAAAAAC AAGTAAGCAT GGTGAAAACA AGAGGTGAAA CCATTGGCTC GTAG
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Protein sequence | MEETISLREL FETLRKRLML IVLITALATI ISGVVSYFFL TPIYQASTQI LVNQAKSEQQ LYNYNEIQTN VQLINTYSVI IKSPTILEKV KEELNLDLTV DELNEQIQVS SEKDSQVFSV TVQDPDPAMA AKIANKTADV FKNEIVKIMN IDNVTILSKA EVKENQAPVK PKPMLNMAIA FVVGLMTGVG LAFLLEYLDN TIKTETDVEK HLGLPVLGAV SIISAEESKK AKKQVSMVKT RGETIGS
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