| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3113 |
|---|
| Symbol | |
|---|
| ID | 7976758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3133418 |
|---|
| End bp | 3134821 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644799899 |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_002951038 |
|---|
| Protein GI | 239828414 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000265772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTCC AACAACCGTT TACTTATTAT GCTGTGATTT TGTCTCTGTT TCTCGTTCCG
CTTGTTTCTT ATAAAACGTA TATCGGCCCT TTGCCGTTGT CAGCGGAAGT CGTGGCGATT
CCGCTGCTAA CGATTGCCGC TATCATCGAT TATGTGCAGA AAAGAATCAC GTTGAATGAT
TTCAACATCA AGCTGATTGC AGCGGCGTTT CTGTTATTTT TCATCATTGC GGTTATTTCT
TTAACGCAAG CGGTCAGCCT CGCTCCAGCC GTCATGGAGC TTGCGCGCTA TCTTTCGTAC
GTTGTCTTGT TTCTCATTGT CGTGAAAGTT CGTTTTACAC GCAAACAATA TATCGACTTT
GCCAAAGTGT TTGGGCTATC GGTCTTGATC ATCGGCGTTT ACGGAATTGT GCAATATATT
TTCGGCATTT CCCTCAACAC GGCAGGGCTG TACGCGCTGA AGGAAGCGAA AGGCCGCGTG
GACTCGACGC TTGTGAATCC GAACTACTAT GCTTCGTTTC TTAATTTTGT CATTCCGACT
TTAGTGTTAT TAGCGGTTGT ATATTTCAAA GATAAAAAAG CGCAGCTATT GATGTTCGCG
CTGTATGGCA TTTACGTGAT TAACTTGGTG CTCACCTATA CGCGTGCGGC TTGGGTGGCG
ATGATCGGCG GATTCGTATT GATGGTCTTG CTCATTCCGA AAGATTTCAT TAAAAACGCC
GTTCGTCCGC ATATACTTCT CTCTTTTGTT GTCTTGCTTA CGGTTGTCTA CTTCATGCCA
GATGTTCAGT CCCGTACGTA TTCGGCGCTG TATGCAATGG AGAAGATTCT CATTCGTAAC
CTTCCAGGTC ATATCGCCGA TGCCGATCAT TCACGAGGAG AAGACGGAGG ATTTTTTACA
CAAGAGCCGG AGGAAGAGGA GAAAGTCGAA GATAACGCGA CGACGAGCCG CGCTGTTGTC
TCCCGTGTCA CGCTTTGGAA AACGGGATGG GTGATGATGA AAGAAAACCC GATCCTTGGT
GTCGGTATCG GAAATTATCT TGTGAGATAC AAAGACTATG TCACGAAATA TCCAGAACTG
TATATCGGGC ATGACCAGTA TTCCGTGCAC AACTCGTATT TAAAGGTTGG ATCGGAAACA
GGATTTATTG GGCTAGCCGC ATTCTTGATC ATCTATATCA TCTATTACGT GTACTTGCTC
CGCCTTTATT TTTCCGCAAC CAACCGGCTA AGCAAGGTCA TTGTCATCGG TTTGATTGCG
GGAAGCGCTA CATTCATGGT GCAAAACTTA TCTAACAATC TCATTTTCAT CCCACAGCTG
AATACGATCT TTTGGCTTGT GTCTGGACTG GCGATCGCCT TTGTGTATCA AAATAATGAA
AAAACAACAA GCATGCAGGA ATAA
|
|---|
| Protein sequence | MRFQQPFTYY AVILSLFLVP LVSYKTYIGP LPLSAEVVAI PLLTIAAIID YVQKRITLND
FNIKLIAAAF LLFFIIAVIS LTQAVSLAPA VMELARYLSY VVLFLIVVKV RFTRKQYIDF
AKVFGLSVLI IGVYGIVQYI FGISLNTAGL YALKEAKGRV DSTLVNPNYY ASFLNFVIPT
LVLLAVVYFK DKKAQLLMFA LYGIYVINLV LTYTRAAWVA MIGGFVLMVL LIPKDFIKNA
VRPHILLSFV VLLTVVYFMP DVQSRTYSAL YAMEKILIRN LPGHIADADH SRGEDGGFFT
QEPEEEEKVE DNATTSRAVV SRVTLWKTGW VMMKENPILG VGIGNYLVRY KDYVTKYPEL
YIGHDQYSVH NSYLKVGSET GFIGLAAFLI IYIIYYVYLL RLYFSATNRL SKVIVIGLIA
GSATFMVQNL SNNLIFIPQL NTIFWLVSGL AIAFVYQNNE KTTSMQE
|
|---|
| |