| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1062 |
|---|
| Symbol | |
|---|
| ID | 7976842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1116512 |
|---|
| End bp | 1116985 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644798015 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_002949188 |
|---|
| Protein GI | 239826564 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAATCT TACCAATTGT GACATACCCA GCGGATATTT TAGAAACGAT GTGCGAACCG
GTAAAACAAT TTGACCGTCA GCTTATTCAG CTGTTAAATG ACATGTATGA AACAATGATA
GATGAGGACG GCGTCGGCTT AGCCGCGCCT CAAGTCGGAA TCGCGAAACA AATTGCCGTT
GTTGATGTCG GTGACAAGCA CGGCCGGATT GAACTGATCA ATCCGCGCAT TATAGAAGCG
CGCGGGGAGC AAATCGGTCC GGAAGGCTGT CTAAGTTTTC CAGGGCTGTT TGGTGAAGTA
AAACGCGCCA ATTATGTAAA AGTTCGTGCT CAAGATCGGC GCGGTCGGGT GTTTACGCTT
GAAGCAACCG AATTTTTAGC GCGCGCGCTT CAACATGAAA TCGACCATTT AAACGGAATA
TTGTTTACTT CGAAAGTAAT TCGTTATTAC GATCCGGAGG AATTAGAAGG GTAG
|
|---|
| Protein sequence | MAILPIVTYP ADILETMCEP VKQFDRQLIQ LLNDMYETMI DEDGVGLAAP QVGIAKQIAV
VDVGDKHGRI ELINPRIIEA RGEQIGPEGC LSFPGLFGEV KRANYVKVRA QDRRGRVFTL
EATEFLARAL QHEIDHLNGI LFTSKVIRYY DPEELEG
|
|---|
| |