| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3450 |
|---|
| Symbol | |
|---|
| ID | 2688143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 3794113 |
|---|
| End bp | 3798645 |
|---|
| Gene Length | 4533 bp |
|---|
| Protein Length | 1510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637128145 |
|---|
| Product | glutamate synthase-related protein |
|---|
| Protein accession | NP_954490 |
|---|
| Protein GI | 39998539 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0069] Glutamate synthase domain 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA AGACCATCGA CCCCTCCGGC CTCGTCCCCC CCGAGCGGGA CGCCTGCGCC
ATCATCTGTC ACATCAACAA GGAAGCCCGT CCCACCCACG GCAACGTCCA ACGGACCATC
GAGGCCCTGG TGAAGATGGG GCACCGGGCC GGTGAAATCA ACGGCGAAGG AGACGGGTGT
GGCGTCCTGA CCGACATCCC CCGAACGATC TGGCGGGAGG TCCTGGCTGG CGCAGGCGCC
GACCCCGATC TGGCCGAAGC TCCCGGCTTT GCCGTGGGGC ATTTGCTTCT GCCGAAGGAG
GCCATTGTCG CCGATCCGCA GCTGCAGGCG GCAATCCTTG GCCGGTTCTC CGCCGCCGGC
GTCCAGTTGC TTGTGGAGCG GCCCGGGATT GTCCGGAGCG AAGTCCTCTC CAGCCGCGCA
AGGGAAGGGG AGCCCCTCTT CTGGCAGGTG GCGCTCCTCT GCCCGGAGAA GGTGGCAGCA
CCAAAGCTCC TGTTCGAACT CCAAACATCC ATCGAGCGGG ATTTCACGGT CCACGTGGCG
TCTCTCTCCA CCGATGTGAC CGCCTGGAAG GTTCACGGCG CACCGGAACT CCTTCCCCGT
TACTATCCCG AATTGCGGCG CCGCGACTTT CTCTCCTCAG TTACCATCGG TCACAGCCGT
TATTCCACCA ACACGCTCCC CACAGTGCTC CGGGCCCAGC CCTTTTCGCT TCTGGGGCAC
AATGGCGAGA TCAACACCAT CGCCCGGCTT CGGGAAGAGG CTCGGATGAT GGGAATTCCT
CTCTTCGCCG ACGGCTCCGA CTCCCAGGAC CTGAATCGGA CCCTGGAAGG GCTCATGTTC
CGCTATGGTC TCACCCTGTT CGAGGCGATG GAGGTGGTTT TCCCGCCCAT TTTCAGCGCC
ATGGACGGCA TGGGGCCGGA GCTGAAGGCC ATGTATACCT GGTTCCGCCG CTTTCTGAAG
GCGTCAGCCC AAGGGCCCGC GGCCATCATT GCCCGCCATC GCAATCTCTG CATCTTCAGC
GTGGACGCCA TGGGGCTGCG CCCTCTCTGG GTGGGTGAGA CCGACCGGGA GATATTTGCC
TCGTCGGAAC TGGGCGTCGT CCCCCATGAG GAGATCCTGA GCGACCCGAA GCCCCTGGCC
CCCGGCGAGA AGGTGGGGGT GCGGATCGTG GCGGGGCAAC AGGTGGAGAT CATCGGGCAC
CCGGCCCTGC GGGGGGAGGT TTACCAGAGC TTCCGGAAGC GGACGAACCT GGCGTCCCAG
GAGAAGTGGG TAACGCAGGG GGCGGCACTG GGGGACGGGC TGCCGTCCCT GGCGGTCCGC
TTCGGCCGGA GCGCCAAACT CCACCAGGAC AACCTCATGT CCGCCTTTGC CTGGAAGTCC
AGCGATCTGT CCATTCTGCG AGAGATGGCC GGCAGCGGCT CGGACCCTAT TGCGTCCCTG
GGGTACGACG GCCCCCTGGC GTCGCTTTCC AGCCGGCGTC AGAATCTCTC CGACTACTTC
AAGGAACAGG TGGCTGTGGT GACCAATCCG GCCATTGACC GGGAACGGGA GGCAGAGCAT
TTTTCCACCA GGGTCTACCT GGGGCCGCGG CCCCTGTTCC GAGGCCCCGC CCGCCTGGCG
GTGACGCTGG AGGTGCCGCT GCTGACCGGT GGCCGCCGTA CCGGCATCGA AGCGGCCGAC
GCCGCCGTGG CCCGGGAGTT CGGCACCGCC AGCCTGGAGG CGCTCGTGGC CGCCTTTGGC
GAGGGCAAGG GGCGGTGTCG GGTAATTCCG TGCCACATGG CAAAGGAGGA ATGTCTGGGA
GCCGCCCTGG CGCGCCTGAC CCGCGAGGCT GTGGAGGCAG TGTCCCGGGG GGCTGCGGTG
CTCCTGCTGG ACGACAGCGA CTGCTTCGCC CCGGGGAAGA GCTTCATCGA CCCGTTTCTG
GTGACGGCGG TCCTCCACAA GGGGCTCAAG GAGGCCACCG ACGCCTCGGG GGAAAGTCTG
CGGCGGCGGA CCGCCCTGGT GGTCCGGTCC GGGGCGCTCC GCAGCCTCCA CGACCTCATA
TTCGCTCTCG GCATGGGGGC CGATGCCCTT TGTCCCTATC TCATGTGGGA AGGGGCCGGC
GATGGTCCGG GGATGAAGAA CCTCTTCTCG GTCGTTGCCA AGGGTCTCGA AAAGGTCATC
TCCACCATGG GGACCCACGA GATCGGCGGC TACGGCAAGT ACTTCGCATC CATCGGCCTT
TGCCGGCATC TGGCGGAGAT ATTTGAAACC CCCAACTTCT GCGGCTCGGG GCAGGGCGGG
CTCACCCTTG AGCGGCTGGA GGAGGAAAAC CGCTCCCGCA GCTCCGTGGC CCGCAGCCGC
GAAAAACAAC CGGTGCCGGT CCAGTTCCGG CTCTATCCCA AAATTTGGAA GATGGTGGGG
GCCGTGGCCA AGATGGAGGA GACCTACGCG GACCTCTCCC GCCTCATCCA GCAGTACGAG
GCGGAGAACC CCCTGGCCAT CCGGCACCTG CTCGACCTCC GCTACACCCA GGAACTGACC
GTGGACCCGG ACGAGGTGGA CACCACCGTG GGGGACCATA ACCTGCCGAT CCTGATTTCC
GCCATGAGCT TCGGTTCTCA GGGGGAGACT CCTTTCAGGA TCTACGCCGA AGCGGCAAAG
CGCCTTAACA TCATCTGCAT GAACGGCGAG GGGGGCGAAA TCGCCGACAT GCTGGGGCAG
TACCGGAAGA ACCGGGGGCA GCAGATCGCC TCGGGGCGCT TCGGGGTGAA CATGGCATTC
CTCAACTCCG CCGACTTTCT GGAGATCAAG GTGGGGCAGG GGGCCAAGCC CGGCGAGGGG
GGGCATCTCC CCGGCTTCAA GGTGACGGCC AAGATCGCTG CAGCTCGCCA CGCCACGCCC
GGCGTCAGCC TCATTTCCCC CTCCAACAAC CACGACATCT ACTCTATCGA GGATCTGGCC
CAGATCGTCG AGGAACTCCG TACCGCCAAC CCTTGGGCCC GCATGTCGGT GAAGGTGCCA
GCGGTGGCGG GAATCGGCAC CATCGCCCTC GGCGTGGCCA AGGCCGGGGC CGACATCATC
ACCATCAGCG GCTACGACGG CGGCACCGGC GCGGCCCGCA AGCACGCCAT CAAGTTCGTG
GGGTTGCCCG CGGAGATCGG GGTCTCAGAG GCCCACAAGG CGCTGGTGGC GGCCGGGATG
CGCCAGAAAG TGGAGATCTG GGCCGACGGC GGCGCCCGCA CCGGCCGGGA CGTGGTAAAA
CTCATGCTCC TCGGCGCCAA CCGGGTCGGT TTCGGCACCA TGGCCATGGT GGTCATCGGC
TGCACCGCCT GCCGGGGCTG CCATCTCGGG ACCTGCCACG TGGGAATCGC CACCCAGATC
GAAACCGCGG AGGAGGCCGA AGCCCGGGGA CTCAAGCGGT TCGTTCCCCG GGTGCTGGAA
AACGGGGTCA TTTACATGAG CACCTTTTTC CGGGGGATGA GTCGGGAAAT CAGGATCCTC
ACTGCCAAGC TCGGCTTCCG GCGCACCCAG GACCTGGTGG GGCGGAGCGA TCTCCTCGCC
CAGGCCCGGG GCCTCGACCG CCTGGACCTG ACGGAGTTGC TCCGCCCGGC CCGACCGGAG
GAGCATCAGC CCTTCGAACC CGAGGTGCGC ATCATCCGCA AGCCCCTCAA TTACCTGACC
TCTCTTATCT CCGGGCTCGT GACCGACTCT TTCGCCAAGG GCGAGGAGCG GGTCCGGTAC
GATGACGACA GTGCCACCAG CTCCGACCGG GCCATCGGCA CCCATCTGGC CGGTGCCTTG
GAGCGCGGTG TGGCCGAGGG GCGCGTTCGG ACCGGGCAGC GGGCGCTCCT CCAGTTCCGG
CGCGACTCCA TCCCGGGCAA CGGCTTGGCC GCCTTTTCCA TCGACCGGCT CACCATCCGG
GTAGAGGGAG GGGCTCAGGA TGGCGTGGGC AAGAGTACCT CCGGCGGCAG AATCGTCATC
CTCAAGGGTG AGAACCGGGA GGGGCGCCGG GTGGGTGGGA CTGTGGGCAA GGGGCTCGCC
TACGGTGCCC AGGGAGGAAC CTTCCTTGTC CAGGGAGATG CCGACAGCAG GGCCTGCATC
AGGCTCTCCG GGGCCGATGT GGTCTTCGGC TCCCGCATCC GCGAGCCGGT TGACGACTTT
CGAGGGGACA TCGCCTCCCG GGCAAACCTT AAGGGTTTCG CCTTCGAGTA CATGACCGCC
GGACGGGTGG TGGTCCTGGG GGATCCGGGC CCCTGGATCT GCTCCGGCAT GACCGGTGGC
GTGGTGTACT GCCACCTGGA CGGAGCCATG GGGTTCACCC GTGAGGCCCT GCGTCGGCGG
CTGGCCAAAG GGGCCGGGGT GGAGATCCGG GACGTTGAGG AAGAGGATGT GGCAAGCATT
GGGGAGCTCC TCCTGAAGTA CCACCGGGAG CTCCTCCACT CCCACCAGGA GGAAGAAGCC
GACGCCGTGG AGGGGATCAT TGCCGACACC CGGAGCTGTT TCGTTAAGAT CGTGCCGGAG
AAGAACATCG TTACCCCCAG GAGCACCGAG TGA
|
|---|
| Protein sequence | MADKTIDPSG LVPPERDACA IICHINKEAR PTHGNVQRTI EALVKMGHRA GEINGEGDGC
GVLTDIPRTI WREVLAGAGA DPDLAEAPGF AVGHLLLPKE AIVADPQLQA AILGRFSAAG
VQLLVERPGI VRSEVLSSRA REGEPLFWQV ALLCPEKVAA PKLLFELQTS IERDFTVHVA
SLSTDVTAWK VHGAPELLPR YYPELRRRDF LSSVTIGHSR YSTNTLPTVL RAQPFSLLGH
NGEINTIARL REEARMMGIP LFADGSDSQD LNRTLEGLMF RYGLTLFEAM EVVFPPIFSA
MDGMGPELKA MYTWFRRFLK ASAQGPAAII ARHRNLCIFS VDAMGLRPLW VGETDREIFA
SSELGVVPHE EILSDPKPLA PGEKVGVRIV AGQQVEIIGH PALRGEVYQS FRKRTNLASQ
EKWVTQGAAL GDGLPSLAVR FGRSAKLHQD NLMSAFAWKS SDLSILREMA GSGSDPIASL
GYDGPLASLS SRRQNLSDYF KEQVAVVTNP AIDREREAEH FSTRVYLGPR PLFRGPARLA
VTLEVPLLTG GRRTGIEAAD AAVAREFGTA SLEALVAAFG EGKGRCRVIP CHMAKEECLG
AALARLTREA VEAVSRGAAV LLLDDSDCFA PGKSFIDPFL VTAVLHKGLK EATDASGESL
RRRTALVVRS GALRSLHDLI FALGMGADAL CPYLMWEGAG DGPGMKNLFS VVAKGLEKVI
STMGTHEIGG YGKYFASIGL CRHLAEIFET PNFCGSGQGG LTLERLEEEN RSRSSVARSR
EKQPVPVQFR LYPKIWKMVG AVAKMEETYA DLSRLIQQYE AENPLAIRHL LDLRYTQELT
VDPDEVDTTV GDHNLPILIS AMSFGSQGET PFRIYAEAAK RLNIICMNGE GGEIADMLGQ
YRKNRGQQIA SGRFGVNMAF LNSADFLEIK VGQGAKPGEG GHLPGFKVTA KIAAARHATP
GVSLISPSNN HDIYSIEDLA QIVEELRTAN PWARMSVKVP AVAGIGTIAL GVAKAGADII
TISGYDGGTG AARKHAIKFV GLPAEIGVSE AHKALVAAGM RQKVEIWADG GARTGRDVVK
LMLLGANRVG FGTMAMVVIG CTACRGCHLG TCHVGIATQI ETAEEAEARG LKRFVPRVLE
NGVIYMSTFF RGMSREIRIL TAKLGFRRTQ DLVGRSDLLA QARGLDRLDL TELLRPARPE
EHQPFEPEVR IIRKPLNYLT SLISGLVTDS FAKGEERVRY DDDSATSSDR AIGTHLAGAL
ERGVAEGRVR TGQRALLQFR RDSIPGNGLA AFSIDRLTIR VEGGAQDGVG KSTSGGRIVI
LKGENREGRR VGGTVGKGLA YGAQGGTFLV QGDADSRACI RLSGADVVFG SRIREPVDDF
RGDIASRANL KGFAFEYMTA GRVVVLGDPG PWICSGMTGG VVYCHLDGAM GFTREALRRR
LAKGAGVEIR DVEEEDVASI GELLLKYHRE LLHSHQEEEA DAVEGIIADT RSCFVKIVPE
KNIVTPRSTE
|
|---|
| |