| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3226 |
|---|
| Symbol | |
|---|
| ID | 2687686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 3538273 |
|---|
| End bp | 3540003 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637127919 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | NP_954267 |
|---|
| Protein GI | 39998316 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAC GACCCATGAT AACGGCACTG GTCTTCTTCC TGGGAACGGC GGCCCCGGCG
GCGGCCCTCT CTCCCTCCCT GAGCGTGACC GATTCTCACA ACCGCCACAA CCTGTCCGTA
AGCGGCCCGG GGCTCACCGG TGCGACCCGC GCCTCCACCG AAGAGCGGGT CTGCATTTTC
TGCCATACGC CCCACCACGC CACGAGCATA ACCCCCCTCT GGAGCCGCGA GTTGTCCAGC
GCGCTCTACA CCCCCTACGA CTCGTCGACC CTCAAGGCAA TCCAGAAACC GGGCCAGCCT
ACCGGCGCAT CCCGTCTTTG CCTGGGGTGT CATGACGGCA CCATCGCCCC CGGCATGCTC
TCGGGGGGCA AGATGATCGC GGGGCTGCCG ACCCTGCCCA CGAATGTGCG CTCGAACCTG
TCCACTGATC TCTCCGACGA CCATCCCATT TCCTTTCCCT ATGCCGGATC CATCTCGGTC
GCCGCCGTGC TCCGGCTGCC GGCCGAACTG CCGCCCGAAA TCTCGCTCGA AGACGGCAGA
ATCGAATGCA CCAGCTGCCA CGATCCCCAC AAGGACCGCT ACCCTCCGGC TGATCATCCG
CAGAAATCGG GGAAATTCCT GGTGCTCGAC AACAACAATT ACTCGGCCCT CTGCACCGCC
TGCCACAGCC GCGCCGGGCT CACGGAGGGC GCCCACTACC TGCCGGGCGA TCCCTGCGAA
AGCTGTCACC AGGTCCACCG GGCCGATCAG CCGGCACGGC TGCTGAAGGG AGCCAATGTG
CAGGAGACCT GCGTCCTCAC CTGCCACAAC GGAACCGGCA CGGTGGAAAC ATCCGGGACC
GACATCCGCT CCGCATCGGT CTTCGGCAAA GCTCATCAGA CCGGCCGGCT CGTTCTTTCC
GGCAGGCACG ACGCCGACGA GAACCCCCTC GACTTCGAGC CGTCACAGCC GCACGTGGAG
TGCGTCGATT GCCACAATCC CTGCATCACC CGTCATGAAT CAACACCTCT TGCTTCGCCG
CCGACGCTGA ACGGCCGGCT CGTAGGGGTT ACCATCGCCA AGTCGCCCGA CGGCATCAAG
ACTTACGCCG ACAGCGAATA TGCCATCTGC TACAAATGCC ACGGCGACCG GAGTTTCGTG
CCCCCGGCCG TGCCCCGCAG GGTCCAGACC GGTGACCAGA GCCTCCGCTT TGCCCAGGAA
AACCCCTCGT ATCACCCGGT ATCGGCGCCG GGCAAAGGGA TGAGCGTGCC AAGCCTGCGC
TTTGAAATCG TCGGGTTCAG GCCCGCTCGG ACCCTCTCCA TCTCAAGCCT CATCTACTGC
ACCGATTGCC ATTCGAGCAA CAAGGGCAGC AAGGTGGGGG GGAGCGGCGC ATCCGGACCC
CACGGCTCCG ATTACCAGCC AATCCTGATG GACCGCTACG AGCACGACAC CTATCCCCTC
GCCTATGCCG AGAGCAACTA CTCCCTCTGC TTCCGTTGCC ATGACCAGAC GATTCTGCTG
GACCCGGGCC GATCGGCGTT TCCGCTCCAC CAGTCCCACC TGGTCAACCA TCAGGTACCC
TGCTCAGTCT GCCACGACCC CCATGGCGTT CCCCTGGTTC TGGGGGGCAC CACGGCTGCA
AACAGCCACC TGATCAACTT CGATACCCGC TTCGTCACCA CCGGCAGCTA TGACTCTCCG
GGTCGCAGCT GCACCGTGAG TTGCCACTCG GCCAACCCGA GAACCTACTG A
|
|---|
| Protein sequence | MAARPMITAL VFFLGTAAPA AALSPSLSVT DSHNRHNLSV SGPGLTGATR ASTEERVCIF
CHTPHHATSI TPLWSRELSS ALYTPYDSST LKAIQKPGQP TGASRLCLGC HDGTIAPGML
SGGKMIAGLP TLPTNVRSNL STDLSDDHPI SFPYAGSISV AAVLRLPAEL PPEISLEDGR
IECTSCHDPH KDRYPPADHP QKSGKFLVLD NNNYSALCTA CHSRAGLTEG AHYLPGDPCE
SCHQVHRADQ PARLLKGANV QETCVLTCHN GTGTVETSGT DIRSASVFGK AHQTGRLVLS
GRHDADENPL DFEPSQPHVE CVDCHNPCIT RHESTPLASP PTLNGRLVGV TIAKSPDGIK
TYADSEYAIC YKCHGDRSFV PPAVPRRVQT GDQSLRFAQE NPSYHPVSAP GKGMSVPSLR
FEIVGFRPAR TLSISSLIYC TDCHSSNKGS KVGGSGASGP HGSDYQPILM DRYEHDTYPL
AYAESNYSLC FRCHDQTILL DPGRSAFPLH QSHLVNHQVP CSVCHDPHGV PLVLGGTTAA
NSHLINFDTR FVTTGSYDSP GRSCTVSCHS ANPRTY
|
|---|
| |