Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3016 |
Symbol | |
ID | 2686663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 3305627 |
End bp | 3311104 |
Gene Length | 5478 bp |
Protein Length | 1825 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637127709 |
Product | hypothetical protein |
Protein accession | NP_954058 |
Protein GI | 39998107 |
COG category | [S] Function unknown |
COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAGTT GGGGGAGAGG GATTTGGCGG CTGGCTGTAA TGCGCGGTGG ACTGGTGGTT GTGGTTTCTG CCCTGCTGCT CTTCGGGGGG GCGGCTGTGG CCATGCAACT CCCGGAGCCG GGCGAGATCG AGCGGCTCAA GGAGTCGGGC GAGTTCGAGA ACCGGAAAAA GTTCGCCGAG GAGATCGGCA ACCACAAGAT TGATCCCGAG CTGGTGAAGA GGGCCGTCAA CAAGGCTAAG AAGAAAGCCC TCCGCCAGCA GGGGTTCACG GCAAACGAGG CCGACCAGAT GGCGGGAGCC TACGCACCGC CTCCCGCCTG GAGCGGCATG CCCACCACTG GCAGCGTGAA ACTCTTTGCC CTCCTCATCG ACTTCTCCGA TTACCCTGCC GTAACGCCCC AGGCCACGGT CCATGACAAG CTCTTCGGCG CCGGTAACCC AGCCGAAGCC CCCTACGAGA GTCTCGCCGC ATTCTACAGC CGCTCATCCT ACGGCCTTCT CGATTTTTCC GGCGGGACGA CGCTGGGGTG GTACCGGCCC GGCTACAGCC GGAGTGCAGT AACCCAGACG CCCGCCGGCC GCGAGAACCT CATCAAGGAG GCCCTCAACT ACTTTAATAC CCAGGGCCAC GACTTCTCCC AGTACGACAA CAACAGCGAC GGCAAGATCG ACTACTTCCT CGTGATCTGG ACCGGGCCGG CCGGCCCCTG GGCATCGTTC TGGTGGGGCT ACGCCACCTC GTTTTCGGAC TTCAACTATC TCCTCGACGG GAAGCGCCTC GGCAAGTACT CCTGGCAGTG GGAGGGGAGC CCCTACGGTC AGCAGTTCGG CCCCCTGGTC ACGATTCACG AGACCGGCCA TGCCCTGGGG CTTCCCGACT ACTACGACTA CAGTGCTACT GCAGGACCCA AGGGCGGGGT TGGCGGCCTC GACATGATGG ACCACAACTG GGGGGACCAC AGCGCCTTCA GCAAGTGGGT TCTGGACTGG ATCGACCCGG TGGTGGTGGC CGGCGGCTCC CAGACCATTA CCCTCAACCC CTCCGCCACC TCCACCGACG CGGTCCTCAT CATGCCGGGG ATCACCTCCA GCGACCTCTT CGACGAGTAT TTCCTGGTCC AGAACCGGCA CCGCGCCGGC AACGACGTCC ACTACCCCAA CGACGGGCTC CTCATCTGGC ATGTGGATGC GACACTCAAC TCCTCCGGGA CCAACTACCT CTATAACAAT TCGGACACCG CCCGCAAACT GCTGCGGCTC ATGGAGGCCG ACGGCCTGGA GGAGATAGAG AAGAACCTTT CCTACAACAC TGCCGACGCG GGGGACTACT ACGTTCCCGG TGCTTCCTTC GGTCCGGCCA CGGTTCCGTC GAGCAGGAGC TACGGGGGGC TCAATACCGG TGTCACGGTC ACCAATATCA CCCGTTCCGG CAACCAGGTG ACGGCAGCGT TCAGCATCGG CGCCGCTGCT CCCTCGGGGA CCGTCAAGAT CAACGGCGGC GCCGCGGCCA CCAATTCTAC GACCGTTACC CTGAACCTCA CGGCGGGGGG CGGGGCCAAC CCGGTCTCCC AGATGCGCTT CAGCAACGAT GACGCCACCT GGAGCGCCTG GGAAGCGTAC AAAACCACCA GGACCGGCTG GACCATCCCT GCCAGCGACG GCGAGAAGAC GGTTTATGCC CAGTTCCGGG ACAACCTCCA GATCGAGTCG TCCAGCTACT ACGATACCAT TGACCTCGAC ACGGTTGCGC CGGTGGCGGT GGTTGTGGCC AACAGCCCCC TGGCGGGTCC GACCAAGGCG ACCACGTTCG GCTTTGGCGT GAACGGCGGC GACGTCGTTT CATACAAGTA CAAGATCAAT AGCGGTGCCT GGTCGGCCGA GATCCCGGTT AAGACCTCCA TGAATATCGT GGGGTTGGTA AATGGTTCCT ATACCCTTTC GGTTGTCGGC AAAGATGCCG CAGGAAACTG GCAGTCCACG GCTTCGCCTA CCACTGTTTC CTGGGATGTT GACACCATCA AGCCGGTGAC GACGGCCTCT CCGGCGGGTG GGACCTATGC CGCCGCCCAG ACCGTGACCC TTTCCTCCAG TGAAACCGCC ACCATTTACT ACACCACCAA TGGAACAACG CCGACGACCG CCTCGCCCCA GTACAGCGGG CCCATCACGG TGACTCCCAC GTCCACACTC AAGTTTTTTG CCGTGGATCA GGCCGGCAAT GCGGAAGCAG TGAAGAGCCT GGTTTACCAG CTTCCTCCCG TGGCAGCGCT GACAGGTGTG CCGGCCGCCA GGACCAAGGC AACGGTCGCA GCCATCACGG TGGGGGGGGC TACGGCCGTT GCATACAAAT TCCGGCTCGA CAATGGCACT TGGTCGGCTG AAACGCCAAT TGCCACGAAG ATCAGCCTAT CCGCGCTGGC CGCCGGCTCC CACACGGTGG ACGTGATTGC CAAAAACGCG CTTGGCGCCT GGCAGACGAC GGCGACCACC GCCTCCTGGA CGGTGGACCT TGCCGCTCCG GTTACAACCG CGTCACTCGC CGCAGGGATC TACAAGCCGG GCCAGACAGT GAGCCTCTCC GCCAGTGAAA CCGCCACCGT CTATTACACG ACGAACGGGA CCACGCCGAC CACCGCGTCG GCCAAGTACT CGGCTCCGCT GGCCATCAAT ACGTCCACGA CCCTGAAATT CTTCGCCGTT GACCAAGCCG GGAATGCGGA GGCGATAAAA ACAAACATCT ATACCATCAC CCTGGTCAGC GGGACTCCTC CGACCACGAC GAAGCTTGCC ACCGCGACCC TGACGGTGGC GGGCATCGGT GTCTCGGCCT ACAAATACTC GCTTGACGGC GGAGCACTGT CGGCCGAAAT ACCGGTTGCC ACCAAAATCA GCCTGACCGC CCTTGGGACC GGTTTGCACA CGGTATCGGT AATCGGCAAA ACCGCAGCAG GGGTATGGCA GGTAGCCCCG ACCGCTGTCA GCTGGACGGT CGAGCAGACC GCGCCGACCA CCACTGCCTC CCCTGCCGGC GGCACCTATG CCGCATCCCA GACCGTCACC CTGACGGCGG ACGAGACCGC GACCATTTAC TATACGATCA CCGGCCTTGC ACCCACGACC TCTTCGGCAA AGTATACAGG CCCGATCACG GTTGCTCCGA CCAAGGTGCT CAAGTTCTTT GCCGTGGACC AGGCGGGCAA CGCGGAAGCG GTGAAGACCG AGATTTACGC TTTGCCTGTC ACGGCAATTA TTGCCGGAAC ACCGGCAGCG AAGACCAAGT ACACGACCGC TACCCTGACG GTGGGAGGGA GCGGAGTGGT AGCCTACAAA CGGAGTGTGG ACGGTGGTGC GTGGTCGGCG GAAACCCCGG TTGCGACCAA GATCGCACTG ACCGGCCTTG CCGCCGGCGC CCACAGGGTG GATGTCATTG CCAAGAACGC CGCCGGCGGG TGGCAGGATG ATCAGGCCCC GACCACGGTC CAGTGGACGG TTGATCTAAC TCCTCCAGTT ACCACCGCAT CACCGGCGGG AGGGACCTAT GCGACGCCCC AGACCGTAAA CCTTTCGGCC GACGAGACGG CCACCATCTA CTACACGACG AACGGGACGA CTCCCACGAC CGCGTCGGCC AAATATGTCG GGCCGATTCC GTTGCCGGCC ACCGCCACCC TCAAGTACTT CGCCATTGAC CCCGCAGGCA ATGCCGAGGC GGTGAAGACC CAGAGCTACG CCCTTCCGCC GTTGGCCGTG ATCAACGGCG TACCTGTTGC GAGCAAGGCT ACGTCCGTCA CGCTCACCAT CGGTGGTGTT GGTGTGGTTG CCTATAAATA CAAGCTCGAC GGCGGCTCCT GGTCCGCCGA GATCCCGGTG GCGACAAAAA CGGCCATAAC CGGCCTTTCG GAAGGGGCGC ATACCGTCTC GGTCATTGGG AAGAGCGTGG CGGGCACGTG GCAGGCTACG TCGGTTGCCT CCTCGAAGTC CTGGATCGTC GACCTCACTG CTCCCACGAC GGCCGCCTCG CTTGCCGCCG GAGTCTACAA GGGGGGGCAG GCAGTCACGC TGTCGCCCGA CGAGACGGCC ACCGTCTACT ACACGACCAA CGGCACAACA CCCACGACCG CGTCTGCCAA GTACACCGCG CCGCTGACCG TTAATGCTAC GTCAACGCTG AAATTTTTCG CAATCGATAC GGCGGGGAAC GTCGAGGCGG TCAAGACCTT CTCTTACGTC ATCGTAACCC TGGCCGGTGC ACCGGGCGGC ACAACCAAGC TCACGAGCGC CACTCTGACC GTGGGCGGCT CCGGTGTTGC CGCCTACAAG TTCAAGCTCG ACAACGGGGC CTGGTCGGCC GAGACGCCGC TGGCGACCAA AATCTCCCTT GCCGGTCTTG CTGCCGGAAC TCACACGGTT TCCGTGGTCG GCAGGAATGG TTCCGGCGTC TGGCAGGCCA ATGCCGACGC GACCACAGCT TCCTGGACCG TCGAGGTGGC GCCGCCTGTA ACCAGTGCCT CGCCGGCGGG GGGCACCTAT GATGCGCCCC AGGTGGTAAC TCTCTCGGCC AATGAGACGG CCACCATCTA CTACACCCTC ACCGGTGCCG CGCCGACCAC CGCCTCGTCC AAATACGCGG CGCCTGTCTC CGTTGCCCCC GGCAAAACCC TGAAGTTCTT CGCCGTTGAT CAGCACGGCA ACGCCGAGGC GGTTAAAACC GAAATTTATG CTCCGTCTCC TCTCGCGGTA CTTTCCGGGA CGCCGGCGAC TTTTTCCCGT GCCACCTCAG CGACGCTCAC GGTCGGCGGC ACCGGGGTGG TCGCCTACAG GTGGAAGCTC GATAGCGGCG CCTGGTCTTC GGAAACCCCG GTTGCCACGA AAATTGTTCT TTCCGGCCTC GCCTCCGGTT CCCATGCGGT TGCCGTCCTT GGCAAAAACC TGGTCGGAAC CTGGCAGGAT GTGCCCACTG CCGTCGCGTG GACGGTTGAT ATTTCCGCGC CGGTGACCAC CGCCTCGGTG CCCGGCGGAA CCTATGCGAG TGCCCAGAGC GTAGAGCTTT ACTCCAGCGA GACGGCCACC ATTTACTACA CTGTCAACGG TGCGGCGCCG ACCACGGCTT CGCCGAAATA TACCGGCCCG ATCGTCATCG GTACGACCCA GAGCCTCAAA TACTTTGCTG TCGATCAGGC AGGCAACGTC GAGGGGGTCA AGGCACAATC CTTCACGATA AAGCCGGCAG CCGTCATCAA TGGTATTCCG GCTGATCCTA CCACTGCGAC AACGGCGACC TTTACCGTCG GCGGACCATA CGTGGTTTCC TACAAGTACA AGCTCGACAA TGGCGTCTGG TCAGTCGAGA TCCCCGTTAC GCAGGCACGG AGTCTTGCGG GGCTTGCTGA TGGAACGCAT ATGCTTTCGG TGCTGGGCAA AAATGCTGGG GGCACGTGGC AGACCGTAGA GACAACGGCT GTCTGGACGA TCCAATAG
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Protein sequence | MGSWGRGIWR LAVMRGGLVV VVSALLLFGG AAVAMQLPEP GEIERLKESG EFENRKKFAE EIGNHKIDPE LVKRAVNKAK KKALRQQGFT ANEADQMAGA YAPPPAWSGM PTTGSVKLFA LLIDFSDYPA VTPQATVHDK LFGAGNPAEA PYESLAAFYS RSSYGLLDFS GGTTLGWYRP GYSRSAVTQT PAGRENLIKE ALNYFNTQGH DFSQYDNNSD GKIDYFLVIW TGPAGPWASF WWGYATSFSD FNYLLDGKRL GKYSWQWEGS PYGQQFGPLV TIHETGHALG LPDYYDYSAT AGPKGGVGGL DMMDHNWGDH SAFSKWVLDW IDPVVVAGGS QTITLNPSAT STDAVLIMPG ITSSDLFDEY FLVQNRHRAG NDVHYPNDGL LIWHVDATLN SSGTNYLYNN SDTARKLLRL MEADGLEEIE KNLSYNTADA GDYYVPGASF GPATVPSSRS YGGLNTGVTV TNITRSGNQV TAAFSIGAAA PSGTVKINGG AAATNSTTVT LNLTAGGGAN PVSQMRFSND DATWSAWEAY KTTRTGWTIP ASDGEKTVYA QFRDNLQIES SSYYDTIDLD TVAPVAVVVA NSPLAGPTKA TTFGFGVNGG DVVSYKYKIN SGAWSAEIPV KTSMNIVGLV NGSYTLSVVG KDAAGNWQST ASPTTVSWDV DTIKPVTTAS PAGGTYAAAQ TVTLSSSETA TIYYTTNGTT PTTASPQYSG PITVTPTSTL KFFAVDQAGN AEAVKSLVYQ LPPVAALTGV PAARTKATVA AITVGGATAV AYKFRLDNGT WSAETPIATK ISLSALAAGS HTVDVIAKNA LGAWQTTATT ASWTVDLAAP VTTASLAAGI YKPGQTVSLS ASETATVYYT TNGTTPTTAS AKYSAPLAIN TSTTLKFFAV DQAGNAEAIK TNIYTITLVS GTPPTTTKLA TATLTVAGIG VSAYKYSLDG GALSAEIPVA TKISLTALGT GLHTVSVIGK TAAGVWQVAP TAVSWTVEQT APTTTASPAG GTYAASQTVT LTADETATIY YTITGLAPTT SSAKYTGPIT VAPTKVLKFF AVDQAGNAEA VKTEIYALPV TAIIAGTPAA KTKYTTATLT VGGSGVVAYK RSVDGGAWSA ETPVATKIAL TGLAAGAHRV DVIAKNAAGG WQDDQAPTTV QWTVDLTPPV TTASPAGGTY ATPQTVNLSA DETATIYYTT NGTTPTTASA KYVGPIPLPA TATLKYFAID PAGNAEAVKT QSYALPPLAV INGVPVASKA TSVTLTIGGV GVVAYKYKLD GGSWSAEIPV ATKTAITGLS EGAHTVSVIG KSVAGTWQAT SVASSKSWIV DLTAPTTAAS LAAGVYKGGQ AVTLSPDETA TVYYTTNGTT PTTASAKYTA PLTVNATSTL KFFAIDTAGN VEAVKTFSYV IVTLAGAPGG TTKLTSATLT VGGSGVAAYK FKLDNGAWSA ETPLATKISL AGLAAGTHTV SVVGRNGSGV WQANADATTA SWTVEVAPPV TSASPAGGTY DAPQVVTLSA NETATIYYTL TGAAPTTASS KYAAPVSVAP GKTLKFFAVD QHGNAEAVKT EIYAPSPLAV LSGTPATFSR ATSATLTVGG TGVVAYRWKL DSGAWSSETP VATKIVLSGL ASGSHAVAVL GKNLVGTWQD VPTAVAWTVD ISAPVTTASV PGGTYASAQS VELYSSETAT IYYTVNGAAP TTASPKYTGP IVIGTTQSLK YFAVDQAGNV EGVKAQSFTI KPAAVINGIP ADPTTATTAT FTVGGPYVVS YKYKLDNGVW SVEIPVTQAR SLAGLADGTH MLSVLGKNAG GTWQTVETTA VWTIQ
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