Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2229 |
Symbol | tmk |
ID | 2687571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2444982 |
End bp | 2445623 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637126922 |
Product | thymidylate kinase |
Protein accession | NP_953278 |
Protein GI | 39997327 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.558567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTATT TCATTACATT CGAAGGCATC GAGGGGTGCG GCAAAACGAC CCAGATCAAG CGGGCGGCGC AGTCCCTCAG GGAGGCGGGC CACCGGGTGG TCGTTACGCG CGAACCGGGC GGTTGCCCCA TTGCCGACGA CATCCGGGCT ATCCTGCTGG ACGCCGGCAA CAGCGCCATG GTACCCACGA CGGAGCTCCT CCTCTACGCG GCGGCGCGTG CCCAGCACGT GGCCGAGGTC ATCGCGCCCG CCCTGGCGGA GGGTGCCGTA GTCCTCTGCG ATCGCTTTAC CGATTCCACT CTCGTCTACC AGGGCTTCGG CCGCAACCTG GACCGGGATC TCATTGCCCG GCTCAACACG CTGGCTGCGG GACAGATCCG GCCGGACCTC ACAATCCTCC TCGACTGCCC CGTGGCGGTG GGGCTTGCCC GGGCCGCGGC GCGGATCAAC TCCCGGCAGA CAAACCGGGA GGAACGTTTC GAGCGGGAAT CGCTCCTCTT TCACGAGCGG GTGCGGGAGG GATTCCTCTC CCTGGCCGGC GGGGAACCCC ACCGGTTCGC CGTGATCGAC GGAAATGATG GAGTAGAAGC GACGGCGACG GCCGTGGCGG ATGTACTCCT GAACCGCGTG CCCCGGAGGT AG
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Protein sequence | MGYFITFEGI EGCGKTTQIK RAAQSLREAG HRVVVTREPG GCPIADDIRA ILLDAGNSAM VPTTELLLYA AARAQHVAEV IAPALAEGAV VLCDRFTDST LVYQGFGRNL DRDLIARLNT LAAGQIRPDL TILLDCPVAV GLARAAARIN SRQTNREERF ERESLLFHER VREGFLSLAG GEPHRFAVID GNDGVEATAT AVADVLLNRV PRR
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