| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1612 |
|---|
| Symbol | gpmA |
|---|
| ID | 2687419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1766005 |
|---|
| End bp | 1766748 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637126292 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | NP_952663 |
|---|
| Protein GI | 39996712 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0588] Phosphoglycerate mutase 1 |
|---|
| TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACGC TCGTTCTGAT TCGTCATGGG GAGAGTGTCT GGAACAGGGA AAACCGTTTT
ACCGGCTGGA CTGACGTGGG GCTGACCGAT AAGGGCGCGG CAGAGGCCCT GCGTGCCGGT
CGTACCCTGA AAAACGAGGG GTTTGCCTTT GACGAGGCGT TCACCTCAGT GCTCAAGCGG
GCCATCAAAA CCCTCTGGAT CGTTTTGGAG GAGATGGATC AGATGTGGAT TCCGGAGCAC
CGTCACTGGC GGCTTAATGA ACGCCACTAC GGCGCGCTCC AGGGACTCAA TAAGGCCGAA
ACTGCCGAAA GGCACGGCAT GGAACAAGTT CATGTCTGGC GCCGCAGCTA TGATATTCCG
CCACCGCCCC TGGCCGCCGG CGATCCGCGC AACCCTGCAC GGGACCCGCG CTATGCGGAG
CTTGATCCCG CAGATATCCC CCTGACCGAG TCGCTCAAGG ATACCGTAGC CCGTTTCCTT
CCCTACTGGC ACGAGACGAT TGCGCCCCGC ATTCTCGCGG GCCGCCGCCT GCTCATCGCC
GCCCATGGCA ACAGTCTGCG GGCCCTGGTG AAGTACCTGG ACGGCATCGG GGACGACGCC
ATTGCCGGTC TGAATATTCC CACCGGCATT CCCCTTGTCT ATGAGCTGGA AGATGACCTG
CACCCCATAC GAAGCTATTA CCTGGGTGAT CCTGACGAGG TTGCCCGGGC CACCCAGTCG
GTGGCGGATC AGGTAAAGAG GTAG
|
|---|
| Protein sequence | MRTLVLIRHG ESVWNRENRF TGWTDVGLTD KGAAEALRAG RTLKNEGFAF DEAFTSVLKR
AIKTLWIVLE EMDQMWIPEH RHWRLNERHY GALQGLNKAE TAERHGMEQV HVWRRSYDIP
PPPLAAGDPR NPARDPRYAE LDPADIPLTE SLKDTVARFL PYWHETIAPR ILAGRRLLIA
AHGNSLRALV KYLDGIGDDA IAGLNIPTGI PLVYELEDDL HPIRSYYLGD PDEVARATQS
VADQVKR
|
|---|
| |