| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1496 |
|---|
| Symbol | |
|---|
| ID | 2686125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1642257 |
|---|
| End bp | 1642529 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637126172 |
|---|
| Product | pilin domain-containing protein |
|---|
| Protein accession | NP_952547 |
|---|
| Protein GI | 39996596 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.232938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCCAATT ACCCCCATAC CCCAACACAA GCAGCAAAAA GAAGAAAGGA GACACTTATG
CTTCAGAAAC TCAGAAACAG GAAAGGTTTC ACCCTTATCG AGCTGCTGAT CGTCGTTGCG
ATCATCGGTA TTCTCGCTGC AATTGCGATT CCGCAGTTCT CGGCGTATCG TGTCAAGGCG
TACAACAGCG CGGCGTCAAG CGACTTGAGA AACCTGAAGA CTGCTCTTGA GTCCGCATTT
GCTGATGATC AAACCTATCC GCCCGAAAGT TAA
|
|---|
| Protein sequence | MANYPHTPTQ AAKRRKETLM LQKLRNRKGF TLIELLIVVA IIGILAAIAI PQFSAYRVKA
YNSAASSDLR NLKTALESAF ADDQTYPPES
|
|---|
| |