Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1471 |
Symbol | |
ID | 2687599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1612857 |
End bp | 1614032 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637126147 |
Product | HD domain-containing protein |
Protein accession | NP_952522 |
Protein GI | 39996571 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCTGG AGCTCTGCAG ATTGTCGTTG CAGCAGACGC AGGAACTCCT GAGGCTCACT GATGCCACGC TCAAGAACAT ATGCTCTCGC AGGTTTTCCG GTGAGGAACT CTACTCCGAG GCGATACGGC GGGTTCTCGG TGGTGGCGGC AAGCGGGGAC CGGAAAGTAT TTTTCTCCTC ATTGACGGCA TTGGTGGTAC GAGCAGAGGA TGGATCTTTC AGCTCCAAGC AGGAGAGTTG GTAAGAAGTT CAGATGAAAT TCTCGTAGAT GCCGACTCGG TTTATTCACT GGGCCGCCTC GGTAGCGAGG TTCTCGTGTC GAACTGGCGT GAGAGCTTCG AGTCGATTGA GCGCTATCAG GTAATCTTTC ATCCCGACAT TGTCAAACAT ATAGCAAAGC CTATCAGGAA CTTTGTCGCA TGTCAGATCA GCGGCGAGAG TAATGGTGCG CTCCTTGCAT TTAATTACGC TGGGGAAGCC ACAGAGTACG ACGGCGATGT GCTTCGCGGA CTGTCGGTTG TCATTGGCTC CCTTGTCACG CTGTCGGTGA TGGTTCGCGA AACCGAGCAC GCCTTCATTT ACACCATCGA GGCATTGGCC CGGGCGTGCG AGGCGGCCGA GGAGAGCACG GGTGATCATA TTGTACGGGT AAATCGCTAT GCCGGAGCCC TTGCCGCCCA TATGGATCTC TCTCCCGACT TTGTCGAGGT GATTTCCTAT TCAGCCCAGA TGCACGACGT GGGGAAGATT CGGGTTCCGA CGGCTATCCT CCTGAAGCCC GGCCCCCTTG ATGAGGCTGA AGAACGGGTT ATGCGCCTTC ACCCGGAATT CGGGGAGCAG ATTCTGGGTG ATTCTCCCCG TCTGAGCGTG GCACGGGAGA TTGCTCTGAG TCATCATGAG AATTGGGATG GAAGCGGGTA TCCCCGAGGC TTGCAGGGTG AAGCCATTCC GCTGGCCGGT AGAATCGTGA AGCTTGCGGA TGTCTATGAT GCACTCCGTT CCAGGCGCAG TTATAAAAAG GCCTTGAGCC ACGCAGAAGC GCGCGCTGTC TTCTTGAACG GCGATGAGCG GATCACGCCA CGCAGTCATT TCGACCCTCG GGTTCTTGAG ACGTTCTTTC GCATAGAGCC TCTCTTTGAG CGAATCTACC AGAGTTCGCG CAACCAGCAA GTATAG
|
Protein sequence | MTLELCRLSL QQTQELLRLT DATLKNICSR RFSGEELYSE AIRRVLGGGG KRGPESIFLL IDGIGGTSRG WIFQLQAGEL VRSSDEILVD ADSVYSLGRL GSEVLVSNWR ESFESIERYQ VIFHPDIVKH IAKPIRNFVA CQISGESNGA LLAFNYAGEA TEYDGDVLRG LSVVIGSLVT LSVMVRETEH AFIYTIEALA RACEAAEEST GDHIVRVNRY AGALAAHMDL SPDFVEVISY SAQMHDVGKI RVPTAILLKP GPLDEAEERV MRLHPEFGEQ ILGDSPRLSV AREIALSHHE NWDGSGYPRG LQGEAIPLAG RIVKLADVYD ALRSRRSYKK ALSHAEARAV FLNGDERITP RSHFDPRVLE TFFRIEPLFE RIYQSSRNQQ V
|
| |