Gene GSU1341 details

Gene Information

• Locus tag: GSU1341
• ID: 2686469
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1467582
• End bp: 1468286
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637126015
• Product: ABC transporter, ATP-binding protein
• Protein accession: NP_952394
• Protein GI: 39996443
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTCA TACAAATCAA TGATCTCACC AGGCACTACG CCGGCGGCGA CGAGACCGTC 
CAGGCGCTCC GGGGCGTAAG CCTGACCATC GAAGACGGCG AGTTCGTCAC CATCATGGGC 
CAGTCCGGAT CGGGCAAGAG CACGCTCCTG TCGGTCCTGG GGGGAATGAA CCACCCCACC 
GCCGGCGAGG TGGAAATGGC CGGAGTCCGG CTCTACGAGC TCTCCGGCGA GCAACTGGCC 
GACTTTCGCG CCGAGAAGCT CGGCTTCGTG TTCCAGTCGT TCCACCTGGT GCCGTACCTG 
ACGGCCCTGG AGAACGTCAT GCTTCCCCTG TCCATTACCA GGATGAAGAA CCGCGACAAG 
ATCGCTGCGG CACGTGAAGC CCTGGAGCGG GTCGGGCTGG GCGGCAAGGC CGACCGGCTC 
CCCAACCAGC TCTCCGGCGG CGAGCAGGAG CGGGTCGCCA TCGCCCGGGC CATCGTCAAG 
AAGCCCCCCA TCATCCTGGC CGACGAGCCC ACCGGCAACC TGGACACGAA AACCAGCGAA 
GAGGTCATGG ACCTGTTCCG CCGCCTCAAC GCCGCGGGCC ACACCGTTGT CATGGTCACC 
CATAACCCCG ACAACTGCGC CTACGCCGAC CGGACCATCC GCCTGCGCGA CGGCCTGGTT 
GTCGAAGACG GCGTGGCCGA CGCAACTACG CGAACCGCCG CCTGA 

 

Protein sequence

MALIQINDLT RHYAGGDETV QALRGVSLTI EDGEFVTIMG QSGSGKSTLL SVLGGMNHPT 
AGEVEMAGVR LYELSGEQLA DFRAEKLGFV FQSFHLVPYL TALENVMLPL SITRMKNRDK 
IAAAREALER VGLGGKADRL PNQLSGGEQE RVAIARAIVK KPPIILADEP TGNLDTKTSE 
EVMDLFRRLN AAGHTVVMVT HNPDNCAYAD RTIRLRDGLV VEDGVADATT RTAA