| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1227 |
|---|
| Symbol | |
|---|
| ID | 2688231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1329835 |
|---|
| End bp | 1330653 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637125901 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | NP_952280 |
|---|
| Protein GI | 39996329 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGTC TTGCCCCTTC CTTTTTCCAC AAGGAGGGGT GCGACTGTCG GGTTGACCTG
ACCGATACCC GCGGGGTTTC CATCAGGATC GAGAATCTCA ACAAGTATTT CGGCGAAAAG
CATGTCCTGA AGGATGTCAA TCTGGCCATC AATGCGGGCG AGACCTTCTG CATCATCGGA
CCGTCGGGAA CCGGCAAGAG CGTTCTCCTG CGTCATATCG TCAAGCTGGA TCGTCCCGAC
AGCGGAGAGA TCTTCATCGA CGGCCATCCG GTCTTCGTCA ACGCGGGGAA GGATACGCCG
AGCGACTACC GCTACAGCAT GGTGTTCCAG TCGTCGGCTT TGTTCAACTC CCTGACCGTG
GGCGAGAACG TGGGGCTCTG GCTGCGCGAG AAGCGGATCT GCAAGGAACA TCGCATCCGG
GAGATCATCC GCGAGAAGCT GGCCATGGTG GGCTTGGAGA ATACCGAGCA GCTCAAGACG
TCGGAACTGT CGGGGGGCAT GAAGAAGCGG GTTGCCATTG CCCGGTCCCT GGCCATGAAC
CCCGATCTCA TACTGTATGA CGAACCGACG GCGGAGTTGG ATCCCGTGAC CACCGACGAA
CTGGCGAATA CCATCCTGAA GCTCAAGGAG ACGACGAAGA ACACCACCAT AATCGTGACT
CACGACCTGA ACTTCGCCCT CTATGTCTCG GACCGCATCG CCATGATGCA CGACGGGCGG
ATCGTCGATG TCGGCACCCC AACGGAGATC AAGGCAAGTC AAAACCCGAT TGTGAGGGGG
TTCATCTACA CGACCACCAA GGGGATCAAG GGCGAATGA
|
|---|
| Protein sequence | MHGLAPSFFH KEGCDCRVDL TDTRGVSIRI ENLNKYFGEK HVLKDVNLAI NAGETFCIIG
PSGTGKSVLL RHIVKLDRPD SGEIFIDGHP VFVNAGKDTP SDYRYSMVFQ SSALFNSLTV
GENVGLWLRE KRICKEHRIR EIIREKLAMV GLENTEQLKT SELSGGMKKR VAIARSLAMN
PDLILYDEPT AELDPVTTDE LANTILKLKE TTKNTTIIVT HDLNFALYVS DRIAMMHDGR
IVDVGTPTEI KASQNPIVRG FIYTTTKGIK GE
|
|---|
| |