Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1078 |
Symbol | |
ID | 2686950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1166019 |
End bp | 1166795 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637125747 |
Product | chromosomal replication initiator protein DnaA, truncation |
Protein accession | NP_952131 |
Protein GI | 39996180 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.648855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCCCGC GCCCGGGCAA GGCGCGCTCT TCTAGGCCGT TTCCCGCCAT GCAACTCGTC TTCGACTTTC CCGTCACCCC CAAATACTCG TTCGACAATT TCGTGATCTG TGCCGGCAAC GAGACTGCCT GCCGTTTCGC CCGGCGCCTG ACGGACGAAA GCGGTTCGGA AAATCTCCTC TACCTCCATG GGCCCTCCGG TTCGGGCAAG ACTCATCTGC TCATGGCAAT GGGGGCCTGT TTTGCGGGCC GGGTCGGGCT TAGGGCAGTG CCATGCATCT CTTTCAAGGA TGTTGACGAG ATCTACCACG GCGAGTATCC GGCCGAAGAG GTCTCAAGGT TGGCCGAGCG TTTTCGCGGC GCGCCAGCCC TTCTTGTGGA TGATCTCCAC CTGATCCCCG ATCAGCAGAG TGTCCGGGTG GAGCTCTGGC AGCTGTTCAA CGACTTCTAC CAGGCCGGCC GGCCCATAGC CATCACCGGG CTCAACCCCC CCAACGAACT TCCCACCCTC GATGGTCACC TGACTTCGCG TCTGCTCTGG GGGCTCGTGG CGAAAACCGA TATTTCGGAC GACGATTCCC GTCGCCGCAT CATGCAGAAG CTGGCAGATG ACCGTCAAAT CATCCTTCCC GCCGACGCGG TCGACTACCT TCTGGTGCAT GTACGCCGCG ACGTGCCGTC CCTTGTTGCC GCGCTGGACG CGATAACCCG CTATGCCTTC AGCGCCAAAC GGAAGATTAC CATGCGACTG GCGCGCGAGG CACTGGCGCT TCTCTAG
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Protein sequence | MRPRPGKARS SRPFPAMQLV FDFPVTPKYS FDNFVICAGN ETACRFARRL TDESGSENLL YLHGPSGSGK THLLMAMGAC FAGRVGLRAV PCISFKDVDE IYHGEYPAEE VSRLAERFRG APALLVDDLH LIPDQQSVRV ELWQLFNDFY QAGRPIAITG LNPPNELPTL DGHLTSRLLW GLVAKTDISD DDSRRRIMQK LADDRQIILP ADAVDYLLVH VRRDVPSLVA ALDAITRYAF SAKRKITMRL AREALALL
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