| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0987 |
|---|
| Symbol | |
|---|
| ID | 2687508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1060383 |
|---|
| End bp | 1063742 |
|---|
| Gene Length | 3360 bp |
|---|
| Protein Length | 1119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637125657 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_952041 |
|---|
| Protein GI | 39996090 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02243] conserved hypothetical protein, phage tail-like region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.365158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCG ATCTCCCCTT GATAGACGGC CGTACGGCCG CGGATGTGGT CGAGAAGATT
CGCGCCACCG CGCCATTCTA TGTGCCCGAG TGGAGCGGCG GTGTCGACGG CGATGCGGGA
AGTGCCCTGA CCGGCGTCTT CGGCGACATG GTGGTGGAGG TGCTCCAGCG GCTCAACCGT
GTGCCCGAGC GCCATCTGGC CGCGTTTCTG GAAGTGCTGG GGTTGCGGCT CCTGCCGCCC
CGGCCGGCCG AAACCGTGGT GGTCTTCACC CTGGCCAAGG ATGCGGACCG AAGCGCCCTC
GTCGCGTCCG GCACCCAGGT CATGGCGGAA AAGACTACGG ACCACCCGGA ACTCCTCTTC
GAAACCGACG AGAACGTGCT GGCCGTCCCG AGCAGGATCA CGGCCCTCTA CAGCACCATC
CCCGATACGG CGGGCGGGAG GGAGAAGGTC TTCGGCCACA CGGAGGCGTG GACCGCGGGA
AGCTCCTTTA CGATCTTCCA CGGCACCGAG AACCTCCAGG AGCATGCCCT CTATCTGCGG
CAGACCGGGC TCTTCACCGT GCGGAGCGGC GTGGAGATCC ACCTGTCCGG CGTGCCGCGG
GCGCTGGCCG ACCAGGTTGC CTGGAGCTAC ACCGATGCCG ACGGCCGGGA GACGCTGTTC
GGGGCGAGAT TCGATGGTGC CGGCGGCACG CTCATTCTCT CCACCGGGGC AGGTCGGCCG
GAACTGGGCC GGTGCGTGGT GAACGGCATC GACGGCATTT GGCTCAAGGG GGTGCCGAAG
GTAGGTGCCG ACGGCACGAC TGCCCTGGCG CGGGTCAAGG ACGCCGTGCT CCGCACCGTG
GTGGGGGTCG GCACCAGGTC GCTTCCCACC GCGGTGATTC ACCCTGACGT GGCTTTTGCC
GGCGATGTTC CCCAGGACCT CACCGTGACT GCCGGTGGCG ATTTCATCCG GAACCTCCTC
CCTTTCGGCG ACAAGCCCAT GCCACTGGCC GCCTTCCACC TGGCAAGCCG GGAGGTCTTC
TCCAAGAGGG GGGCCAGGAT TACCCTCCGC ATTACCTGCG CCACGGACCT TGACGTGCCC
ATCGAGCGGG TCCAGGGGAT CGGCGCCGTC TTCTCGGCCC GGCTCAGGGG AGCGGGCATT
GCCACGGCCG GTGAACTCCT GTCCCGGTCC GACGCCCAGG TTGCCGGGAT AATCCGGGCT
CCCGGCAGCG CTCGCCCGGC TTCCTCCTAC CTGCTCCGGG CCAGGAATAT CCGCGAAGCC
ACGGCCAAGG CCTATTACGA CAAGACCGGA GCGGTCAGCT ACCGGTCAGG CCGTGCTGCC
GCGCTGGGGC CGGGCCTGTC ATGGGAGTAC TGGAACGGGA CCGGCTGGTG TGCCATCAGC
GACGTGACCG ACAGCACCGG CGGCCTCCTG GCCACCGGCG AGGTGACCTT CACCTGCCCC
GCCGACATGG CGGAGGTGGA GGTGAGCGGC CAGCGGAACT GGTGGATCCG GGTCCGGCTC
TCTTCCGGCG ATTATGGCCG GGAGTTCGAG ATCGTAAACG GCCAGGCCGT GGCGGCCGGC
TTCACCCCGC CGCGCCTGGG GCGCATCACC CTCTCCTGGG ACGGCACCGA TCCCTCGGCC
ATGGGTGAGC CCGATTCTAT CCTGACGCGC AATAACCTGG AGTGGGACGA CGGTCTTGCC
GTGCTGCGCA CGGGCGCGGT CTTCCGGCCG TTCCGCCCAC TGGCCGACCT GCGCCCCGCC
TTCTACGCCG GCTTCGACCG CCCCCTGGCC AAGGGGCCCA TCGGCCTCTA CCTGGATCTG
GCCGAAATCG ATTATGCCCG CGACTTCAGG CCCAGGGTGC AGTGGGAAGT CTATGACGCC
GGAGCGTGCG AGTGGTTGAG GCTCGATGCG GAGGACGGCA CAGCCGGCCT CACCCGTGCC
GGCATCGTCC GTGTCGTGGT GCCCGAGGGG GGCGTTCCGG CACCGCTCTT CGGCACGCGG
CTTCACTGGC TCCGGGCGGT GCTCGTGGCA GGGGAGTACG CCCCCACGGC CCTCGGCGCC
GGTCTTCCCT ACCGGCTGCG CCGCGGCTAC CTGAACATCC CCCGCATCAT CGGCAGACCG
GCCCACCTGA AGGGGAGCAT CCTCAATCCG GCCCGGTGGC GGTCGTGGCG GCAGCTTCCC
TCCAACAGCC CCCCCATTGC CCGGGGCATC TACCTCAATG CCGCCCGGGC CCTGCAGCTC
ACCTCCGTGA GGAACGAGCG GCCGGGATCG GGGAACGGGC TGCCGGACCA GAGTTTCACC
CTTGCCCGGA AGCCGGTTTT CGACGACCAG GTCTGGGTCA ACGAGTTCGG GCTCATTTCC
GCCGCAGAGC TGGATCGCCT CGCCGCAGAC GCTCCCGGTC GGGTCAGCCG GGTGACTGAC
CGGGAGGGAC GGGTGAGCGA AGTCTGGGTG CGGTGGGAAG GGCGCGACGA CCTCCTGGCC
TCGGGGCCGC TAGACCGGCA CTACGGCATC GACCGGAGCA GTGGTCTCGT CTCCTTTGGC
AACGGGAAAA GGGGCCGGGT GCTGCCTGCC GGAACGAACA ACGTCCGGGT CAGCTACCGC
ACCGGCGGAG GTGCTGCCGG CAACCTCGGC TGGGGGGCGA TTGCCCGCAT GCGGACCGGC
ATCCCCTTGG TGGACAAGGT CGTCAATCCC GGCCCCTGCG GAGGCGGGGT CGAGGGGGAG
GATATCTCCG CCCTCTACCG GCGGGGCCCC CAGAGCCTGC GGCGCCGCGA CCGGGCCGTG
ACCGTTGAGG ACTACGAGGG CCTGATCAGG GAGCAGTTCC CCGGTATGGC CCTGGTCAAG
TGCCTCCCCG TGTGCGATGA CCGGGGCATG ACCCGCACGG GATGGCTGAC GGTGATCATC
GTGCCGCGCG CGGCCGATGA CCGGCCCATC CCCTCGGCGG CCCTGCGCCG GCGGGTGGAG
GAGTTTGTCG CCGGTCACGG CGCCAACGTA GTGACCGCCC CCTGCCATGC CGTGGTGACC
CGGCCGTCCT ACGTGCGGGT GTCGGTTGAT GCCGCCCTGG TGCCCCGCAG CCTCGACCAG
GCCCCCGCCG TGGAGACGGC GGCCCTTGCC GCTCTCGGGC GGTTCCTCCA TCCCCTGACC
GGCGGGTGGG ACGGCGGAGG GTGGCCCTTT GGCCGCCTGG TCTGCCATTC GGACCTCTAC
CGCTTGCTGG AGGAGATCGA AGGGGTTGAT CGGGTGGCAA GCATGGCGGT AACGGCCGTC
GATGAAATGG GACGTCGGAT GGAGCTTGGC GAGGCGGATG AGTTGACGCG GCCGGTGGAC
CCCTATCTGC TCGTTTCCAG CGGAGACCAT CGGGTCGCGG CACGGGCCGG CGACGTATAG
|
|---|
| Protein sequence | MNADLPLIDG RTAADVVEKI RATAPFYVPE WSGGVDGDAG SALTGVFGDM VVEVLQRLNR
VPERHLAAFL EVLGLRLLPP RPAETVVVFT LAKDADRSAL VASGTQVMAE KTTDHPELLF
ETDENVLAVP SRITALYSTI PDTAGGREKV FGHTEAWTAG SSFTIFHGTE NLQEHALYLR
QTGLFTVRSG VEIHLSGVPR ALADQVAWSY TDADGRETLF GARFDGAGGT LILSTGAGRP
ELGRCVVNGI DGIWLKGVPK VGADGTTALA RVKDAVLRTV VGVGTRSLPT AVIHPDVAFA
GDVPQDLTVT AGGDFIRNLL PFGDKPMPLA AFHLASREVF SKRGARITLR ITCATDLDVP
IERVQGIGAV FSARLRGAGI ATAGELLSRS DAQVAGIIRA PGSARPASSY LLRARNIREA
TAKAYYDKTG AVSYRSGRAA ALGPGLSWEY WNGTGWCAIS DVTDSTGGLL ATGEVTFTCP
ADMAEVEVSG QRNWWIRVRL SSGDYGREFE IVNGQAVAAG FTPPRLGRIT LSWDGTDPSA
MGEPDSILTR NNLEWDDGLA VLRTGAVFRP FRPLADLRPA FYAGFDRPLA KGPIGLYLDL
AEIDYARDFR PRVQWEVYDA GACEWLRLDA EDGTAGLTRA GIVRVVVPEG GVPAPLFGTR
LHWLRAVLVA GEYAPTALGA GLPYRLRRGY LNIPRIIGRP AHLKGSILNP ARWRSWRQLP
SNSPPIARGI YLNAARALQL TSVRNERPGS GNGLPDQSFT LARKPVFDDQ VWVNEFGLIS
AAELDRLAAD APGRVSRVTD REGRVSEVWV RWEGRDDLLA SGPLDRHYGI DRSSGLVSFG
NGKRGRVLPA GTNNVRVSYR TGGGAAGNLG WGAIARMRTG IPLVDKVVNP GPCGGGVEGE
DISALYRRGP QSLRRRDRAV TVEDYEGLIR EQFPGMALVK CLPVCDDRGM TRTGWLTVII
VPRAADDRPI PSAALRRRVE EFVAGHGANV VTAPCHAVVT RPSYVRVSVD AALVPRSLDQ
APAVETAALA ALGRFLHPLT GGWDGGGWPF GRLVCHSDLY RLLEEIEGVD RVASMAVTAV
DEMGRRMELG EADELTRPVD PYLLVSSGDH RVAARAGDV
|
|---|
| |