| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0928 |
|---|
| Symbol | |
|---|
| ID | 2687131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 997428 |
|---|
| End bp | 998864 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637125598 |
|---|
| Product | M16 family peptidase |
|---|
| Protein accession | NP_951982 |
|---|
| Protein GI | 39996031 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTA CGCAACGTTT CGCCCTGTTC TTAGCATTTC TGGTACTCGT ACCCCTTGCC
GCCCTGGGCG CCGAGGCGCC CAAAACAGCA AAGGCCGACC CCCGCACCAT GACCTTCCCG
CAGCCGGCCT TCGAGGTCCC CCGGACCGAG CGGGCGGTGC TGAAAAACGG CATGGTCGTC
CACATGCTCC CGGACCGGGA GCTGCCCGTG GTGAGCCTCA CGGCCTACGT GAACGTGGGG
AGCATCTATG AGCCGGCCGA CAAGGCGGGC CTTGCCGGGC TCACCGGTGC GGTCATGCGG
AGCGGCGGCA CCAGGGATAT GGCCCCCGAG GCCCTGGACG CGGAGCTTGA GTTCATGGCC
TCCTCGGTGG AGGGGGGTAT CGGCAGCGAT GCGGGGAATG TCTCCCTGGC GTCCCTGTCC
CGCAACCTTC CCCGGACCCT GGAACTGTTC GCCCGGGTGA TGATGAACCC GGCCTTCCGG
GAAGACCGGG TTACCCTGGC AAAGAACCGG ACCATCGAGG CCATCCGCCG CCAGAATGAC
GATTCCAAGG GAATCGCCGA CCGTGAACTC CAGAAGGCCC TCTATCCCGG CCACCCCCTG
GGGCGCTTCC CTACGGTGGC CACGGTCCAG TCCATCACCC GCGACGATCT GGCGGCGTTT
CACGACCGCT ATTTCCGCCC CGGTAATGTT GTCATCGCCG CTGCCGGCGA CTTTGACCCC
AAGGAACTGG TGAAGCTCCT GGAAAAGGCC TTTGCAGGCT GGAAGGAAGA GAAGGTCGAT
TTCCCGCCCG TGGCCGAACC GTCCCGGGAG ATGAAGCCCG CCGTGCTCCT GGCGCGCAAG
GAGGTGAACC AGTCGGCCAT CCGCATGGGG CACCTGGGGA TCGACAAGAA CAACCCGGAT
CTCTACGCCA TCAGGGTCAT GGACTACATC CTGGGGGGCG GCTTCACCTC GCGCCTCACC
ACCGAGATCC GCTCCAACCA GGGGCTGGCC TACAACGTGG GTGCGTCCTT CGACGTGGGG
CGCCGCTTCG TGGGCACCTT CGAGGCCGAG ACCGAGACCA AGAGCGGATC CACTGCCAAG
GCCATCGGCC TCATGCGGGA CATCATCGAC GGCATGCGCA AGGAACCGGT GACCGACCAG
GAGCTGAACC TGGCCAAGGA GGCGATCATC AACTCCTTCA TCTTCGGTTT CGCCCGTCCC
GACTTCATAG CCAACCAGCG GGCCCGGCTC GAATTCTACG GCTATCCCGA CGGCTATCTG
GAAAACTACC GGGCCAATAT CGCCCGGGTC ACCAAGGAGG ATGTCCTCCG CGCGGCGCGG
ACCTACCTGC ACCCTGATCG ACTGATCATT CTCGTGGTTG GTGAAGACAA GACATTCGAC
AAACCCCTCT CCACCTTCGG CACGGTTCAG GAGATCAAGC TGGAGAACGG GAAGTAA
|
|---|
| Protein sequence | MTITQRFALF LAFLVLVPLA ALGAEAPKTA KADPRTMTFP QPAFEVPRTE RAVLKNGMVV
HMLPDRELPV VSLTAYVNVG SIYEPADKAG LAGLTGAVMR SGGTRDMAPE ALDAELEFMA
SSVEGGIGSD AGNVSLASLS RNLPRTLELF ARVMMNPAFR EDRVTLAKNR TIEAIRRQND
DSKGIADREL QKALYPGHPL GRFPTVATVQ SITRDDLAAF HDRYFRPGNV VIAAAGDFDP
KELVKLLEKA FAGWKEEKVD FPPVAEPSRE MKPAVLLARK EVNQSAIRMG HLGIDKNNPD
LYAIRVMDYI LGGGFTSRLT TEIRSNQGLA YNVGASFDVG RRFVGTFEAE TETKSGSTAK
AIGLMRDIID GMRKEPVTDQ ELNLAKEAII NSFIFGFARP DFIANQRARL EFYGYPDGYL
ENYRANIARV TKEDVLRAAR TYLHPDRLII LVVGEDKTFD KPLSTFGTVQ EIKLENGK
|
|---|
| |