Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0439 |
Symbol | ubiA |
ID | 2686406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 471184 |
End bp | 472080 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637125105 |
Product | prenyltransferase |
Protein accession | NP_951498 |
Protein GI | 39995547 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAGCG AGGAAGGGCT GGAGAAGGGT ATGTTTGCCA AGATCAGAGT ATTTCTGGAG ATGATCAAGT TTTCCCACAC GGTGTTCGCC CTGCCGTTCG CCTTTACCGG CGCGGTGCTT GCGGCCGACG GCATGCCGTC GGCGCACCAG GTGTTCTGGA TTCTGATGGC TATGGTGGGG GCGCGGACCG CCGCCATGGG CATGAACCGC CTGATCGACG CCGAAATCGA CGCCCGGAAC CCCCGTACCG CAAGCCGCGC CATCCCGGCA GGGCTCATCG GCACGGGGAC GGTGGCCCTT TTCATCGTAC TCTCCATTCT GCTCATGCTC TACGCCGCCT GGCAGCTCAA TCCGCTCTGC CTCTATCTTT CGCCCGTGGC CCTTTTCTTC CTGGGGCTCT ATTCCTACTG CAAGCGGTTC ACCTCCCTGG CTCACGTGGT CCTCGGCATC TGCCTGGCAG CCGCGCCGCT GGGTGCCTGG ATCGCCATCA GGGGCACGGT GGAGGTGCCG GCGATCCTGC TGGGACTCGC GGTCCTCTTC TGGGTGGCCG GGTTCGATAT CCTCTATGCC CTCCAGGATC TGGACTTCGA CCGCGCCAGC GGGCTCCATT CCATCCCGGT GCGGCTCGGG GTAAACGGCT CACTCTGGGC AGCCCGGGTC TTTCATCTGG TGATGCTGGG GCTCCTGGCC GGGCTCTACC TAAGCGCGGG GCTCGGCCCC TGGTTCCTGG CCGGCCTGGC CGCCACCATC GCCATGCTCG GCTATGAGCA CTGGCTCCTG CGCCACGGCG ACCTGACCAA GCTCGACGCA GCCTTTTTCA CCATGAACGG CTACATCAGC ATCACGCTGT TCGTGGCAAC CCTGGCCGAT GTGCTGGCGG GACGGGGGGG CGTATGA
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Protein sequence | MVSEEGLEKG MFAKIRVFLE MIKFSHTVFA LPFAFTGAVL AADGMPSAHQ VFWILMAMVG ARTAAMGMNR LIDAEIDARN PRTASRAIPA GLIGTGTVAL FIVLSILLML YAAWQLNPLC LYLSPVALFF LGLYSYCKRF TSLAHVVLGI CLAAAPLGAW IAIRGTVEVP AILLGLAVLF WVAGFDILYA LQDLDFDRAS GLHSIPVRLG VNGSLWAARV FHLVMLGLLA GLYLSAGLGP WFLAGLAATI AMLGYEHWLL RHGDLTKLDA AFFTMNGYIS ITLFVATLAD VLAGRGGV
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