Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0134 |
Symbol | |
ID | 2688070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 148677 |
End bp | 149777 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637124801 |
Product | ribonuclease Z |
Protein accession | NP_951196 |
Protein GI | 39995245 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.446772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGCC GCCTCCCCTT CCGTTACCTG GAGCCCACCT TCTGCGCGGG GCTCCTGGAC GACCCGGTCC TCCTGGTGAA CGTCCGGCCC CTGGGGCGCT CGATCCTGGT GGACTGCGGC CAGATTCACC ATCTGGCCAA GCGGGTCCTG AAATCCATCG ATGCCGTCTT CGTCTCCCAT GCCCATATGG ATCACTTCAT GGGGCTGGAC ACCCTGGTCC GCCACATTCA CGTCTCCCCG CGGACGGTCG AACTCTTCGG CCCGCCGGGG ATCGCCCGGA AAGTGGCTGC AAAGCTGGCC GGTTACGACT GGAACCTGAC CGAATCCTAC TGGTGCACCT TCCGGGTGAG CGAAGTCCAT CCCGAGCGTA TTGTCCGGTT CACGTTCCCC GGCTCCGAAG GATTTCCCTG CCTGCCCGAG GAAGAGACAA CGCGGGAGGG GACCGAGATC TTCCGCAACG ACTTTCTCGC GGTCGACGCG GATCTCTGCG ACCATAACAC CCTGCCGACC CTGGTCTTTC GCATCACCGA ACGTCCCACC TTCTGGATCG ACGAGGCAAA AGTCGATCAG GAGGGTCTTG TGCCGGGGGA ATGGCTGCGG GAGCTGAAGC ACCGCTTCTA TCGCGGCAGA CTGGATGGGA AGACGATCAC CGTGCCCGTG CGCACGGCCG GCGACACGGT GGCACAACGG ATCCGGGAAG GACGGGAGCT GTTCGAGGCA ATCCGGAGGA GCCAGGAGCC TGCCAGCATT GGCTACCTCA CCGACATCGG CGCCGGCGAC ACCAACCTGG CGACGGTGCG GCGATTACTT GCCGGTGTCA CGCTCCTTGC CTGCGAGTGC TCGTTTCTAG CAGCCGACGT GGCCAAGGCC CGCACCTCCC ACCACCTCTG CACGGCGGAT GTATCGGCCC TCGCCCGGGA GATCCGTCCC GGCTGGCTCC TTCCCATGCA TCTTTCCAAG AGCTACAATA CAAAGGGCCA CCTCCTCTAC CGGGAGCTGA CCCTTGCGCC GGAAACCCGG CTGATCCGCC TGCCCGAGCA TCTTACCCCC CGGCCGCTTC TGCCGGGGGA GTTTCCGGGC CTCTGGAAAA TCGCGGAATA G
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Protein sequence | MKSRLPFRYL EPTFCAGLLD DPVLLVNVRP LGRSILVDCG QIHHLAKRVL KSIDAVFVSH AHMDHFMGLD TLVRHIHVSP RTVELFGPPG IARKVAAKLA GYDWNLTESY WCTFRVSEVH PERIVRFTFP GSEGFPCLPE EETTREGTEI FRNDFLAVDA DLCDHNTLPT LVFRITERPT FWIDEAKVDQ EGLVPGEWLR ELKHRFYRGR LDGKTITVPV RTAGDTVAQR IREGRELFEA IRRSQEPASI GYLTDIGAGD TNLATVRRLL AGVTLLACEC SFLAADVAKA RTSHHLCTAD VSALAREIRP GWLLPMHLSK SYNTKGHLLY RELTLAPETR LIRLPEHLTP RPLLPGEFPG LWKIAE
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